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Nucleic atom dist Protein atom
G2:B.OP1/1 2.91 LYS402:A.N/1
C3:B.OP1/1 2.98 ARG299:A.NE/1
U14:B.OP2/1 2.41 ARG361:A.NH2/1
C15:B.OP1/1 3.08 ARG363:A.NH2/1
C15:B.O2'/1 2.99 ASN354:A.OD1/1
C21:B.O3'/1 3.22 ARG310:A.NH2/1
C21:B.O2'/1 2.88 HIS396:A.NE2/1
G22:B.OP1/1 2.55 TYR392:A.OH/1
C23:B.OP1/1 2.87 HIS398:A.ND1/1
C31:B.O2/1 2.66 TYR165:A.OH/1
A32:B.O2'/1 2.81 ASP291:A.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
G22:B.OP1/1 2.58 34:B/1 2.82 LYS303:A.O/1
G22:B.OP1/1 2.58 34:B/1 3.03 ARG310:A.NH2/1
G22:B.OP1/1 2.58 34:B/1 3.02 TYR392:A.OH/1
A33:B.OP1/1 2.82 36:B/1 3.18 ALA163:A.N/1
A33:B.N3/1 2.76 41:B/1 3.07 ASP291:A.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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