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Nucleic atom dist Protein atom
DT2:A.OP1/1 3.29 ARG21:D.NH2/1
DT2:A.OP2/1 2.96 ARG21:D.NH1/1
DG3:A.OP2/1 3.2 THR52:D.N/1
DG3:A.OP2/1 2.9 THR52:D.OG1/1
DG3:A.OP2/1 2.52 THR55:D.OG1/1
DG3:A.N7/1 3.44 ARG58:D.NH1/1
DG3:A.O6/1 2.96 ARG58:D.NH2/1
DT10:B.OP1/1 2.91 LYS67:D.NZ/1
DT10:B.OP1/1 2.44 TYR78:D.OH/1
DT10:B.OP2/1 2.82 GLN37:D.N/1
DA11:B.OP2/1 3.11 GLN37:D.NE2/1
DA11:B.OP2/1 2.67 SER57:D.OG/1
DA11:B.N7/1 3.06 GLN53:D.NE2/1
DA11:B.N6/1 3.02 GLN53:D.OE1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT9:B.OP2/1 2.83 252:D/1 3.01 ASN38:D.ND2/1
DT10:B.OP2/1 2.6 17:B/1 2.97 ASN38:D.N/1
DA11:B.OP1/1 2.57 18:B/1 2.89 SER57:D.O/1
DA11:B.OP2/1 2.33 18:B/1 2.89 SER57:D.O/1
DT12:B.OP2/1 2.46 20:B/1 2.89 GLU61:D.OE1/1
DG13:B.N7/1 2.58 19:B/1 3.43 ARG58:D.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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