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Nucleic atom dist Protein atom
DG4:C.O5'/1 3.18 ARG324:B.NH2/1
DG5:C.OP1/1 2.92 SER290:B.OG/1
DT8:C.OP1/1 2.81 TYR171:B.OH/1
DT8:C.OP2/1 2.76 GLN89:A.N/1
DA9:C.N7/1 3.06 GLN100:A.OE1/1
DA9:C.N6/1 2.64 GLN100:A.NE2/1
DC10:C.OP1/1 2.57 ARG108:A.NH2/1
DG17:C.N2/1 2.68 GLY66:A.O/1
DA18:C.N3/1 3.21 GLY66:A.N/1
DA20:C.OP1/1 2.56 LYS63:A.N/1
DG22:C.OP2/1 3.27 THR42:A.N/1
DG22:C.OP2/1 2.39 THR42:A.OG1/1
DG22:C.OP2/1 3.11 THR45:A.OG1/1
DG22:C.N7/1 2.98 ARG48:A.NH1/1
DG22:C.O6/1 3.32 ARG48:A.NH1/1
DG22:C.O6/1 3.11 ARG48:A.NH2/1
DA30:D.OP2/1 3.39 ARG30:A.NH1/1
DA31:D.OP2/1 2.94 ALA26:A.N/1
DC32:D.OP1/1 2.97 GLN51:A.OE1/1
DG33:D.N7/1 2.92 LYS44:A.NZ/1
DG33:D.O6/1 3.41 LYS44:A.NZ/1
DC44:D.OP1/1 2.59 ARG71:A.N/1
DC44:D.OP2/1 2.45 ARG106:A.NH1/1
DC44:D.O3'/1 3.22 ARG71:A.NH1/1
DT45:D.OP1/1 3.21 SER99:A.N/1
DT45:D.OP2/1 3.28 SER99:A.N/1
DG47:D.O6/1 2.71 GLN101:A.NE2/1
DA51:D.OP2/1 2.6 GLY175:A.N/1
DA51:D.OP2/1 2.53 LYS115:B.NZ/1
DC52:D.OP2/1 3.19 VAL116:B.N/1
DC53:D.OP1/1 2.61 ARG167:A.NH2/1
DT54:D.O4/1 3.22 ARG118:B.NH1/1
DG55:D.O6/1 3.43 ARG118:B.NH2/1
DA56:D.OP2/1 3.13 LYS158:B.NZ/1
DG4:E.OP2/1 2.55 ARG324:A.NH2/1
DG5:E.OP1/1 2.51 SER290:A.OG/1
DT8:E.OP1/1 2.97 TYR171:A.OH/1
DT8:E.OP2/1 2.81 GLN89:B.N/1
DA9:E.OP2/1 2.85 GLN89:B.NE2/1
DA9:E.OP2/1 2.92 SER104:B.OG/1
DA9:E.N7/1 3.24 GLN100:B.OE1/1
DA9:E.N6/1 2.92 GLN100:B.NE2/1
DA9:E.N6/1 3.24 GLN101:B.OE1/1
DG17:E.N2/1 3.05 GLY66:B.O/1
DA19:E.O3'/1 3.16 LYS63:B.O/1
DA20:E.OP1/1 2.75 LYS63:B.N/1
DG22:E.OP2/1 3.36 THR42:B.N/1
DG22:E.OP2/1 2.8 THR42:B.OG1/1
DG22:E.N7/1 2.82 ARG48:B.NH1/1
DG22:E.N7/1 3.3 ARG48:B.NH2/1
DG22:E.O6/1 2.8 ARG48:B.NH2/1
DA31:F.OP2/1 2.88 ALA26:B.N/1
DC32:F.OP2/1 2.64 GLN51:B.NE2/1
DG33:F.N7/1 3.36 LYS44:B.NZ/1
DC44:F.OP1/1 2.93 ARG71:B.N/1
DC44:F.OP1/1 2.76 ARG106:B.NH1/1
DT45:F.OP1/1 3.04 SER99:B.N/1
DA51:F.OP1/1 2.68 GLY175:B.N/1
DA51:F.OP2/1 2.58 LYS115:A.NZ/1
DC52:F.OP2/1 3.24 VAL116:A.N/1
DC53:F.OP1/1 2.73 ARG167:B.NH2/1
DT54:F.O4/1 3.1 ARG118:A.NH1/1
DG55:F.O6/1 2.97 ARG118:A.NH1/1
DG55:F.N2/1 3.35 TYR285:A.O/1
DA56:F.OP2/1 2.87 LYS158:A.NZ/1
DT6:G.OP1/1 3.15 THR213:B.OG1/1
DG7:G.OP1/1 2.43 ALA216:B.N/1
DT8:G.OP1/1 3.21 ARG257:B.N/1
DT54:H.OP1/1 3.03 ASP156:B.OD1/1
DT54:H.OP1/1 2.94 ASP156:B.OD2/1
DT54:H.O2/1 3.04 ASN185:A.ND2/1
DG55:H.N2/1 3.26 ASN185:A.ND2/1
DA56:H.OP1/1 2.68 ARG186:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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