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Nucleic atom dist Protein atom
DC106:B.OP2/1 3 LYS508:A.NZ/1
DG107:B.OP1/1 2.93 THR506:A.OG1/1
DG107:B.OP1/1 3.02 LYS508:A.N/1
DG107:B.OP1/1 2.72 THR509:A.N/1
DG107:B.OP1/1 2.45 THR509:A.OG1/1
DG107:B.O3'/1 3.01 ARG487:A.NE/1
DG108:B.OP1/1 3.34 ARG487:A.NE/1
DG108:B.OP1/1 3.18 ARG487:A.NH2/1
DG108:B.OP1/1 2.79 THR514:A.N/1
DG108:B.OP1/1 2.65 THR514:A.OG1/1
DG108:B.OP2/1 3.03 SER513:A.OG/1
DG108:B.N2/1 3.15 LYS540:A.NZ/1
DC109:B.OP1/1 2.71 ARG536:A.NH1/1
DC109:B.OP2/1 3.03 SER515:A.OG/1
DC109:B.OP2/1 3.05 ALA516:A.N/1
DC109:B.O2/1 2.8 LYS540:A.NZ/1
DG110:B.N3/1 3.18 ASN583:A.OD1/1
DC111:B.OP1/1 2.93 VAL586:A.N/1
DC111:B.OP1/1 2.89 ARG587:A.N/1
DC111:B.OP2/1 2.59 ARG587:A.NH1/1
DG204:C.OP2/1 3.2 SER674:A.N/1
DG204:C.OP2/1 2.8 SER674:A.OG/1
DG204:C.O3'/1 3.02 ARG746:A.NE/1
DG204:C.N7/1 2.95 ARG677:A.NH2/1
DG205:C.OP1/1 3.13 ARG746:A.NE/1
DG205:C.OP1/1 3.15 ARG746:A.NH2/1
DG205:C.N2/1 3.15 ARG573:A.NH2/1
DG205:C.N2/1 3.26 GLN754:A.OE1/1
DG206:C.OP1/1 2.89 ARG728:A.NH1/1
DC207:C.OP1/1 2.86 ALA570:A.N/1
DC207:C.O5'/1 2.53 THR569:A.OG1/1
DG208:C.OP1/1 2.89 SER575:A.OG/1
DC209:C.OP1/1 2.7 ASP578:A.N/1
DC209:C.OP1/1 2.64 ASP578:A.O/1
DC210:C.O3'/1 2.6 SER543:A.OG/1
DT212:C.OP1/1 2.81 ASN483:A.ND2/1
DG213:C.OP1/1 2.35 SER486:A.OG/1
DG213:C.OP1/1 2.67 GLN489:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG108:B.N2/1 2.99 3025:B/1 3.03 LYS540:A.NZ/1
DG108:B.N3/1 2.8 3025:B/1 3.03 LYS540:A.NZ/1
DC109:B.O4'/1 3.13 3025:B/1 3.03 LYS540:A.NZ/1
DG110:B.OP1/1 2.94 3028:A/1 2.85 ARG536:A.O/1
DG110:B.N2/1 3.35 3040:A/1 2.67 ASN580:A.ND2/1
DG110:B.N2/1 3.35 3040:A/1 3.08 ASN583:A.OD1/1
DC111:B.OP1/1 2.89 3008:B/1 2.91 THR588:A.N/1
DC111:B.O2/1 2.62 3078:B/1 2.68 GLN582:A.O/1
DOC112:B.OP1/1 2.87 3026:A/1 3.06 ARG595:A.NH1/1
DOC112:B.OP1/1 2.87 3026:A/1 3.25 ARG595:A.NH2/1
DOC112:B.OP1/1 2.87 3026:A/1 2.65 GLU786:A.OE1/1
DG205:C.N3/1 3.33 3014:A/1 2.86 GLU615:A.OE1/1
DG206:C.N3/1 2.84 3012:C/1 3.26 ARG573:A.NH2/1
DC207:C.O2/1 2.74 3037:C/1 3.14 ASN580:A.ND2/1
DG208:C.N3/1 2.83 3040:A/1 2.67 ASN580:A.ND2/1
DG208:C.N3/1 2.83 3040:A/1 3.08 ASN583:A.OD1/1
DC210:C.O4'/1 2.97 3057:A/1 2.64 LYS540:A.NZ/1
DC210:C.O4'/1 2.97 3057:A/1 2.79 THR544:A.OG1/1
DT212:C.O3'/1 3.06 3030:A/1 3.02 SER486:A.OG/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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