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Nucleic atom dist Protein atom
DG806:D.OP1/1 2.67 LYS339:A.NZ/1
DA807:D.OP2/1 2.97 THR301:A.N/1
DA807:D.OP2/1 2.52 THR301:A.OG1/1
DG809:D.OP2/1 2.73 SER297:A.N/1
DG809:D.OP2/1 3.15 SER297:A.OG/1
DA812:D.OP1/1 2.84 GLY187:A.N/1
DA812:D.OP1/1 3.41 THR190:A.N/1
DA812:D.OP1/1 2.66 THR190:A.OG1/1
DA812:D.OP2/1 3.16 ASN188:A.N/1
DA812:D.OP2/1 3.15 ILE189:A.N/1
DG813:D.OP1/1 2.78 GLY185:A.N/1
DG813:D.O3'/1 2.98 LYS152:A.NZ/1
DA904:E.OP2/1 2.6 ARG331:A.NH2/1
DC905:E.OP1/1 2.76 ARG331:A.NE/1
DC905:E.OP1/1 3.02 ARG331:A.NH2/1
DT908:E.OP1/1 3.12 LYS275:A.NZ/1
DT908:E.OP2/1 2.61 GLY246:A.N/1
DA909:E.OP1/1 2.67 LYS243:A.N/1
DA909:E.OP2/1 3.06 SER244:A.OG/1
DA912:E.OP1/1 3.15 ALA220:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DDG814:D.OP1/1 2.68 519:A/1 2.49 ASP7:A.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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