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Nucleic atom dist Protein atom
DG1809:H.OP1/1 3.21 ARG1298:B.NH2/1
DG1809:H.OP2/1 2.88 SER1297:B.N/1
DG1810:H.OP2/1 2.6 ASP1294:B.OD1/1
DA1812:H.OP1/1 3.32 GLY1187:B.N/1
DA1812:H.OP1/1 3.07 THR1190:B.N/1
DA1812:H.OP2/1 3.02 ILE1189:B.N/1
DG1813:H.OP1/1 2.83 GLY1185:B.N/1
DA1904:J.OP1/1 3.16 GLY1041:B.N/1
DC1905:J.OP1/1 3.02 ARG1331:B.NH2/1
DC1905:J.OP1/1 2.95 ARG1332:B.NH2/1
DC1907:J.OP1/1 2.89 ARG1247:B.NH1/1
DC1907:J.OP1/1 2.87 ILE1248:B.N/1
DT1908:J.OP1/1 2.79 ARG1242:B.NH2/1
DT1908:J.OP2/1 2.77 GLY1246:B.N/1
DT1908:J.OP2/1 3.08 GLY1246:B.O/1
DT1908:J.OP2/1 2.72 ARG1336:B.NH1/1
DT1908:J.OP2/1 2.72 ARG1336:B.NH2/1
DT1908:J.O5'/1 2.98 ARG1336:B.NH1/1
DA1909:J.OP1/1 2.88 LYS1243:B.N/1
DA1909:J.OP2/1 3.05 SER1244:B.N/1
DA1909:J.OP2/1 3.06 SER1244:B.OG/1
DA1912:J.OP1/1 2.67 ALA1220:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1813:H.O3'/1 3.09 1501:H/1 2.83 GLU1106:B.OE2/1
DDG1814:H.OP1/1 2.5 1501:H/1 2.83 GLU1106:B.OE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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