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Nucleic atom dist Protein atom
DT4:C.OP1/1 2.89 THR155:A.OG1/1
DA5:C.OP2/1 3.28 ARG157:A.NH1/1
DA10:C.OP1/1 2.92 TRP30:A.NE1/1
DA10:C.OP1/1 2.69 ASN32:A.ND2/1
DG11:C.OP1/1 2.89 LYS113:A.NZ/1
DG12:C.O4'/1 3.31 ARG112:A.NH1/1
DG10:D.OP1/1 3.02 ASN174:A.N/1
DG10:D.N3/1 2.75 ARG76:A.NH1/1
DT11:D.OP1/1 2.85 HIS74:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA10:C.OP1/1 2.98 17:C/1 3.15 TRP30:A.NE1/1
DA10:C.OP1/1 2.98 17:C/1 3 LYS113:A.O/1
DG10:D.N2/1 3.06 38:D/1 3.07 ARG76:A.NH2/1
DT11:D.OP1/1 2.79 17:D/1 2.83 LYS60:A.N/1
DT11:D.O2/1 2.71 38:D/1 3.07 ARG76:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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