Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA19:I.OP1/1 3.34 SER56:D.N/1
DT20:I.OP1/1 3.18 ILE54:D.N/1
DA29:I.OP1/1 2.25 ARG34:C.NH1/1
DA30:I.OP1/1 2.68 ARG19:C.N/1
DA30:I.OP2/1 3.02 ARG19:C.NE/1
DG39:I.OP1/1 2.61 SER87:D.N/1
DG39:I.OP1/1 2.94 SER87:D.OG/1
DG39:I.OP1/1 2.97 THR88:D.N/1
DG40:I.OP1/1 2.43 ARG86:D.NH1/1
DC49:I.OP2/1 3.27 SER86:A.N/1
DC50:I.OP1/1 3 ARG72:A.NH1/1
DC50:I.OP1/1 2.85 PHE84:A.N/1
DC50:I.OP2/1 3.27 ARG72:A.NH2/1
DC60:I.OP1/1 2.71 ARG36:B.NH2/1
DC60:I.OP2/1 3.24 ARG36:B.NH1/1
DG68:I.OP1/1 2.51 ARG42:A.NE/1
DG68:I.OP1/1 2.67 ARG42:A.NH2/1
DG68:I.OP2/1 2.76 ARG42:A.NH2/1
DT70:I.OP1/1 2.82 VAL117:A.N/1
DT70:I.OP1/1 2.88 THR118:A.N/1
DT70:I.OP1/1 2.69 THR118:A.OG1/1
DT80:I.OP1/1 3.22 GLY48:F.N/1
DG81:I.OP1/1 2.74 ILE46:F.N/1
DA82:I.OP1/1 2.99 GLY44:E.N/1
DA82:I.OP1/1 2.91 VAL46:E.N/1
DA82:I.OP1/1 3.05 ALA47:E.N/1
DA82:I.N3/1 2.72 ARG40:E.NH2/1
DA83:I.OP1/1 2.82 TYR41:E.N/1
DT90:I.OP2/1 2.27 ARG69:E.NH2/1
DT91:I.OP1/1 2.68 LYS64:E.N/1
DT91:I.OP2/1 3 LEU65:E.N/1
DC101:I.OP1/1 2.41 LYS79:F.N/1
DC101:I.OP1/1 2.63 THR80:F.N/1
DC101:I.OP1/1 2.87 THR80:F.OG1/1
DG103:I.OP1/1 2.35 SER32:D.OG/1
DA111:I.OP1/1 3.21 ALA48:G.N/1
DT112:I.OP1/1 2.99 VAL46:G.N/1
DG122:I.OP1/1 3.08 ARG31:G.NH2/1
DG122:I.OP1/1 2.94 SER36:H.N/1
DG122:I.OP1/1 3.24 SER36:H.O/1
DG122:I.N3/1 2.94 ARG33:H.NH1/1
DG131:I.OP1/1 2.89 ARG80:G.N/1
DG131:I.OP2/1 2.89 LYS79:G.N/1
DT143:I.OP1/1 2.96 ARG42:A.N/1
DT143:I.OP1/1 3.01 THR45:A.OG1/1
DT166:J.OP1/1 3.22 SER56:H.N/1
DA176:J.OP2/1 3.31 ARG34:G.NE/1
DG177:J.OP1/1 2.86 ARG19:G.N/1
DG177:J.OP2/1 3.29 ARG19:G.NE/1
DG186:J.OP1/1 3.23 SER87:H.N/1
DG186:J.OP1/1 3.06 THR88:H.N/1
DG186:J.OP2/1 3.16 SER87:H.N/1
DG186:J.OP2/1 2.54 SER87:H.OG/1
DA187:J.OP2/1 2.56 ARG86:H.NH2/1
DA197:J.OP1/1 2.72 ARG72:E.NH1/1
DA197:J.OP1/1 3.05 PHE84:E.N/1
DA197:J.OP2/1 2.94 ARG72:E.NH2/1
DT198:J.OP2/1 3.11 ARG19:F.NH1/1
DA207:J.OP1/1 2.62 ARG36:F.NH2/1
DA207:J.OP2/1 3.06 ARG36:F.NH1/1
DT216:J.O3'/1 3.35 ARG45:F.NH1/1
DG217:J.OP1/1 2.85 VAL117:E.N/1
DG217:J.OP1/1 2.81 THR118:E.N/1
DG217:J.OP1/1 2.83 THR118:E.OG1/1
DG227:J.OP2/1 3.27 GLY48:B.N/1
DA228:J.OP1/1 2.74 ILE46:B.N/1
DA228:J.OP2/1 2.63 ARG35:B.NH1/1
DA228:J.O3'/1 3.31 GLY44:A.N/1
DA229:J.OP1/1 2.91 GLY44:A.N/1
DA229:J.OP1/1 2.89 VAL46:A.N/1
DA229:J.OP1/1 2.99 ALA47:A.N/1
DA229:J.N3/1 2.65 ARG40:A.NH2/1
DC230:J.OP1/1 2.64 TYR41:A.N/1
DT237:J.OP2/1 2.31 ARG69:A.NH2/1
DT238:J.OP1/1 3.2 LYS64:A.N/1
DT238:J.OP2/1 3.07 LEU65:A.N/1
DG246:J.O3'/1 3.38 ARG83:A.NH1/1
DA248:J.OP1/1 2.95 LYS79:B.N/1
DA248:J.OP1/1 2.81 THR80:B.OG1/1
DA248:J.O5'/1 3 THR80:B.OG1/1
DT250:J.OP1/1 3.37 SER32:H.N/1
DA259:J.OP1/1 3.14 VAL46:C.N/1
DG268:J.OP1/1 2.71 TYR40:D.OH/1
DG268:J.O5'/1 2.86 TYR40:D.OH/1
DG268:J.O3'/1 2.95 ARG31:C.NH2/1
DT269:J.OP1/1 3.19 ARG31:C.NH2/1
DT269:J.OP1/1 2.93 SER36:D.N/1
DA270:J.OP1/1 3.01 LYS34:D.N/1
DC278:J.OP1/1 2.98 ARG80:C.N/1
DC278:J.OP2/1 3.27 LYS79:C.N/1
DG290:J.OP1/1 2.64 ARG42:E.N/1
DG290:J.OP1/1 2.6 THR45:E.OG1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text