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Nucleic atom dist Protein atom
DT3:C.OP1/1 2.77 THR210:A.N/1
DG4:C.OP1/1 3.04 LEU113:A.N/1
DG4:C.OP1/1 2.76 ARG350:A.NE/1
DG4:C.OP2/1 3.2 ARG350:A.NH2/1
DG4:C.O4'/1 2.84 GLN215:A.O/1
DG4:C.N2/1 2.97 SER218:A.OG/1
DG4:C.N3/1 2.67 SER218:A.OG/1
DT5:C.OP2/1 2.76 ARG114:A.NE/1
DT5:C.O4'/1 2.72 SER218:A.OG/1
DC6:C.O2/1 2.88 ARG222:A.NE/1
DC6:C.O2/1 2.86 ARG222:A.NH2/1
DA7:C.OP2/1 2.69 SER258:A.OG/1
DA7:C.O4'/1 2.91 ARG222:A.NH2/1
DA7:C.O3'/1 2.8 ARG229:A.NH2/1
DT8:C.OP1/1 2.86 ARG229:A.NH1/1
DT8:C.OP2/1 2.73 GLY68:A.N/2
DG9:C.OP1/1 3.3 HIS374:A.NE2/2
DG9:C.N3/1 3.35 ASN106:A.ND2/2
DG10:C.OP2/1 2.77 HIS374:A.N/2
DG10:C.O4'/1 3.12 LYS107:A.NZ/2
DG10:C.N7/1 2.81 ARG69:A.NH2/2
DG10:C.N2/1 3.16 ARG313:A.NH2/2
DA11:C.N6/1 3.43 ARG69:A.NH2/2
DG17:C.OP1/1 2.89 TYR28:A.OH/2
DG17:C.OP2/1 3.27 GLN27:A.NE2/2
DA7:D.OP1/1 3.36 ASN84:A.N/2
DT8:D.OP2/1 2.75 ARG86:A.NH1/2
DT9:D.OP2/1 2.86 LYS262:A.NZ/1
DC11:D.O2/1 2.77 ARG313:A.NH1/2
DA15:D.OP1/1 2.87 ARG326:A.NH1/2
DC16:D.OP1/1 2.82 ARG336:A.NH1/2
DA17:D.OP2/1 2.95 LYS228:A.NZ/1
DC25:D.OP1/1 3.07 THR163:A.N/2
DC26:D.OP1/1 2.89 SER193:A.N/2
DC26:D.OP1/1 3.09 SER193:A.OG/2
DT17:E.OP1/1 2.92 ARG362:A.NH1/2
DT17:E.OP1/1 2.88 ARG362:A.NH2/2
DT17:E.OP2/1 3.16 TYR212:A.OH/2
DT17:E.OP2/1 3.06 ARG362:A.NH2/2
DT17:E.O3'/1 2.97 GLN186:A.O/2
DC18:E.OP1/1 3 GLN186:A.N/2
DC18:E.OP2/1 2.75 TYR212:A.N/2
DC18:E.O3'/1 2.74 ASP185:A.OD2/2
DT3:C.OP1/2 2.77 THR210:A.N/2
DG4:C.OP1/2 3.04 LEU113:A.N/2
DG4:C.OP1/2 2.76 ARG350:A.NE/2
DG4:C.OP2/2 3.2 ARG350:A.NH2/2
DG4:C.O4'/2 2.84 GLN215:A.O/2
DG4:C.N2/2 2.97 SER218:A.OG/2
DG4:C.N3/2 2.67 SER218:A.OG/2
DT5:C.OP2/2 2.76 ARG114:A.NE/2
DT5:C.O4'/2 2.72 SER218:A.OG/2
DC6:C.O2/2 2.88 ARG222:A.NE/2
DC6:C.O2/2 2.86 ARG222:A.NH2/2
DA7:C.OP2/2 2.69 SER258:A.OG/2
DA7:C.O4'/2 2.91 ARG222:A.NH2/2
DA7:C.O3'/2 2.8 ARG229:A.NH2/2
DT8:C.OP1/2 2.86 ARG229:A.NH1/2
DT8:C.OP2/2 2.73 GLY68:A.N/1
DG9:C.OP1/2 3.3 HIS374:A.NE2/1
DG9:C.N3/2 3.35 ASN106:A.ND2/1
DG10:C.OP2/2 2.77 HIS374:A.N/1
DG10:C.O4'/2 3.12 LYS107:A.NZ/1
DG10:C.N7/2 2.81 ARG69:A.NH2/1
DG10:C.N2/2 3.16 ARG313:A.NH2/1
DA11:C.N6/2 3.43 ARG69:A.NH2/1
DG17:C.OP1/2 2.89 TYR28:A.OH/1
DG17:C.OP2/2 3.27 GLN27:A.NE2/1
DA7:D.OP1/2 3.36 ASN84:A.N/1
DT8:D.OP2/2 2.75 ARG86:A.NH1/1
DT9:D.OP2/2 2.86 LYS262:A.NZ/2
DC11:D.O2/2 2.77 ARG313:A.NH1/1
DA15:D.OP1/2 2.87 ARG326:A.NH1/1
DC16:D.OP1/2 2.82 ARG336:A.NH1/1
DA17:D.OP2/2 2.95 LYS228:A.NZ/2
DC25:D.OP1/2 3.07 THR163:A.N/1
DC26:D.OP1/2 2.89 SER193:A.N/1
DC26:D.OP1/2 3.09 SER193:A.OG/1
DT17:E.OP1/2 2.92 ARG362:A.NH1/1
DT17:E.OP1/2 2.88 ARG362:A.NH2/1
DT17:E.OP2/2 3.16 TYR212:A.OH/1
DT17:E.OP2/2 3.06 ARG362:A.NH2/1
DT17:E.O3'/2 2.97 GLN186:A.O/1
DC18:E.OP1/2 3 GLN186:A.N/1
DC18:E.OP2/2 2.75 TYR212:A.N/1
DC18:E.O3'/2 2.74 ASP185:A.OD2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG18:D.OP2/1 2.96 2001:A/1 2.96 ASP128:A.OD1/1
DG18:D.OP2/1 2.96 2001:A/1 2.99 ASP128:A.OD2/1
DC18:E.O3'/1 2.73 2001:A/2 2.96 ASP128:A.OD1/2
DC18:E.O3'/1 2.73 2002:A/2 3.21 ASP128:A.OD1/2
DC18:E.O3'/1 2.73 2001:A/2 2.99 ASP128:A.OD2/2
DC18:E.O3'/1 2.73 2002:A/2 3.04 TYR129:A.O/2
DG18:D.OP2/2 2.96 2001:A/2 2.96 ASP128:A.OD1/2
DG18:D.OP2/2 2.96 2001:A/2 2.99 ASP128:A.OD2/2
DC18:E.O3'/2 2.73 2001:A/1 2.96 ASP128:A.OD1/1
DC18:E.O3'/2 2.73 2002:A/1 3.21 ASP128:A.OD1/1
DC18:E.O3'/2 2.73 2001:A/1 2.99 ASP128:A.OD2/1
DC18:E.O3'/2 2.73 2002:A/1 3.04 TYR129:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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