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Nucleic atom dist Protein atom
DT2:C.O2/1 2.85 ASN348:A.ND2/1
DT3:C.OP1/1 2.96 THR210:A.N/1
DT3:C.OP1/1 2.8 THR210:A.OG1/1
DT3:C.OP1/1 2.74 SER216:A.OG/1
DT3:C.O4'/1 3.31 ASN348:A.ND2/1
DG4:C.OP1/1 2.7 LEU113:A.N/1
DG4:C.OP1/1 2.79 ARG350:A.NE/1
DG4:C.OP2/1 2.86 ARG350:A.NH2/1
DG4:C.N2/1 3.4 GLY218:A.O/1
DT5:C.OP2/1 2.78 ARG114:A.NE/1
DT5:C.OP2/1 3.16 ARG114:A.NH2/1
DT5:C.O5'/1 3.28 ARG114:A.NH2/1
DC6:C.O2/1 2.93 ARG222:A.NE/1
DC6:C.O2/1 2.76 ARG222:A.NH2/1
DA7:C.OP2/1 2.67 SER258:A.OG/1
DA7:C.O4'/1 2.99 ARG222:A.NH2/1
DA7:C.O3'/1 2.8 ARG229:A.NH2/1
DT8:C.OP1/1 2.81 ARG229:A.NH1/1
DT8:C.OP2/1 2.85 GLY68:A.N/2
DT8:C.O2/1 2.92 ASN106:A.ND2/2
DG9:C.OP1/1 3.08 HIS374:A.NE2/2
DG9:C.OP2/1 2.95 ARG69:A.N/2
DG9:C.O4'/1 3.06 ASN106:A.ND2/2
DG10:C.OP1/1 2.79 SER373:A.OG/2
DG10:C.OP2/1 2.78 HIS374:A.N/2
DG10:C.O4'/1 3.39 LYS107:A.NZ/2
DG10:C.N7/1 2.31 ARG69:A.NH2/2
DG10:C.O6/1 3.29 ARG69:A.NH2/2
DG17:C.OP1/1 2.89 ARG41:A.NH2/2
DG17:C.OP2/1 3.03 TYR28:A.OH/2
DC18:C.OP1/1 2.9 LYS26:A.N/2
DT8:D.OP2/1 2.75 ARG86:A.NH1/2
DT9:D.OP2/1 2.86 LYS262:A.NZ/1
DC11:D.O2/1 2.71 ARG313:A.NH1/2
DT13:D.OP1/1 2.68 SER311:A.OG/2
DA17:D.OP2/1 2.78 LYS228:A.NZ/1
DT2:C.O2/2 2.85 ASN348:A.ND2/2
DT3:C.OP1/2 2.96 THR210:A.N/2
DT3:C.OP1/2 2.8 THR210:A.OG1/2
DT3:C.OP1/2 2.74 SER216:A.OG/2
DT3:C.O4'/2 3.31 ASN348:A.ND2/2
DG4:C.OP1/2 2.7 LEU113:A.N/2
DG4:C.OP1/2 2.79 ARG350:A.NE/2
DG4:C.OP2/2 2.86 ARG350:A.NH2/2
DG4:C.N2/2 3.4 GLY218:A.O/2
DT5:C.OP2/2 2.78 ARG114:A.NE/2
DT5:C.OP2/2 3.16 ARG114:A.NH2/2
DT5:C.O5'/2 3.28 ARG114:A.NH2/2
DC6:C.O2/2 2.93 ARG222:A.NE/2
DC6:C.O2/2 2.76 ARG222:A.NH2/2
DA7:C.OP2/2 2.67 SER258:A.OG/2
DA7:C.O4'/2 2.99 ARG222:A.NH2/2
DA7:C.O3'/2 2.8 ARG229:A.NH2/2
DT8:C.OP1/2 2.81 ARG229:A.NH1/2
DT8:C.OP2/2 2.85 GLY68:A.N/1
DT8:C.O2/2 2.92 ASN106:A.ND2/1
DG9:C.OP1/2 3.08 HIS374:A.NE2/1
DG9:C.OP2/2 2.95 ARG69:A.N/1
DG9:C.O4'/2 3.06 ASN106:A.ND2/1
DG10:C.OP1/2 2.79 SER373:A.OG/1
DG10:C.OP2/2 2.78 HIS374:A.N/1
DG10:C.O4'/2 3.39 LYS107:A.NZ/1
DG10:C.N7/2 2.31 ARG69:A.NH2/1
DG10:C.O6/2 3.29 ARG69:A.NH2/1
DG17:C.OP1/2 2.89 ARG41:A.NH2/1
DG17:C.OP2/2 3.03 TYR28:A.OH/1
DC18:C.OP1/2 2.9 LYS26:A.N/1
DT8:D.OP2/2 2.75 ARG86:A.NH1/1
DT9:D.OP2/2 2.86 LYS262:A.NZ/2
DC11:D.O2/2 2.71 ARG313:A.NH1/1
DT13:D.OP1/2 2.68 SER311:A.OG/1
DA17:D.OP2/2 2.78 LYS228:A.NZ/2
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Nucleic atom d_n2w water d_p2w Protein atom
DA1:C.N7/1 2.57 2158:A/1 3.02 ASN361:A.ND2/1
DG4:C.OP2/1 2.6 2086:A/1 2.63 SER365:A.OG/1
DT5:C.OP1/1 2.77 2039:A/1 2.96 PRO115:A.O/1
DT5:C.OP2/1 2.66 2038:A/1 3.11 HIS304:A.NE2/1
DC6:C.OP1/1 2.82 2041:A/1 3.08 ARG117:A.NH1/1
DC6:C.OP1/1 2.82 2041:A/1 3.17 ARG117:A.NH2/1
DT8:C.OP1/1 2.76 2103:A/1 3.43 ARG229:A.NH2/1
DT8:C.OP1/1 2.84 2105:A/1 2.78 HIS66:A.O/2
DT8:C.OP1/1 2.84 2105:A/1 2.84 ASN103:A.ND2/2
DT8:C.OP2/1 2.92 2007:C/1 3.07 ALA71:A.N/2
DT8:C.O3'/1 2.53 2008:C/1 3.26 ASN103:A.ND2/2
DG9:C.OP1/1 2.34 2008:C/1 3.26 ASN103:A.ND2/2
DG9:C.N7/1 2.98 2010:C/1 3.12 GLU70:A.N/2
DA7:D.OP1/1 2.82 2018:A/2 3.13 MET85:A.N/2
DA12:D.N3/1 2.81 2029:A/2 2.82 ASN106:A.O/2
DA12:D.N3/1 2.81 2029:A/2 2.89 ARG313:A.NH1/2
DT13:D.OP2/1 3.11 2137:A/2 3.07 SER312:A.N/2
DT13:D.OP2/1 3.11 2137:A/2 2.9 SER312:A.OG/2
DG14:D.OP1/1 3.14 2030:A/2 2.84 SER109:A.N/2
DA15:D.OP1/1 3.14 2015:D/1 3.16 TRP337:A.NE1/2
DA15:D.N3/1 2.76 2096:A/1 2.69 SER225:A.OG/1
DC16:D.OP1/1 3.14 2155:A/2 2.58 ARG336:A.NE/2
DA17:D.OP1/1 2.91 2054:A/1 2.63 ASP128:A.OD2/1
DA17:D.OP1/1 2.91 2054:A/1 2.77 TYR129:A.O/1
DA17:D.OP1/1 2.73 2055:A/1 2.75 GLY131:A.N/1
DA17:D.OP1/1 2.73 2055:A/1 3.26 GLY131:A.O/1
DA1:C.N7/2 2.57 2158:A/2 3.02 ASN361:A.ND2/2
DG4:C.OP2/2 2.6 2086:A/2 2.63 SER365:A.OG/2
DT5:C.OP1/2 2.77 2039:A/2 2.96 PRO115:A.O/2
DT5:C.OP2/2 2.66 2038:A/2 3.11 HIS304:A.NE2/2
DC6:C.OP1/2 2.82 2041:A/2 3.08 ARG117:A.NH1/2
DC6:C.OP1/2 2.82 2041:A/2 3.17 ARG117:A.NH2/2
DT8:C.OP1/2 2.84 2105:A/2 2.78 HIS66:A.O/1
DT8:C.OP1/2 2.84 2105:A/2 2.84 ASN103:A.ND2/1
DT8:C.OP1/2 2.76 2103:A/2 3.43 ARG229:A.NH2/2
DT8:C.OP2/2 2.92 2007:C/2 3.07 ALA71:A.N/1
DT8:C.O3'/2 2.53 2008:C/2 3.26 ASN103:A.ND2/1
DG9:C.OP1/2 2.34 2008:C/2 3.26 ASN103:A.ND2/1
DG9:C.N7/2 2.98 2010:C/2 3.12 GLU70:A.N/1
DA7:D.OP1/2 2.82 2018:A/1 3.13 MET85:A.N/1
DA12:D.N3/2 2.81 2029:A/1 2.82 ASN106:A.O/1
DA12:D.N3/2 2.81 2029:A/1 2.89 ARG313:A.NH1/1
DT13:D.OP2/2 3.11 2137:A/1 3.07 SER312:A.N/1
DT13:D.OP2/2 3.11 2137:A/1 2.9 SER312:A.OG/1
DG14:D.OP1/2 3.14 2030:A/1 2.84 SER109:A.N/1
DA15:D.OP1/2 3.14 2015:D/2 3.16 TRP337:A.NE1/1
DA15:D.N3/2 2.76 2096:A/2 2.69 SER225:A.OG/2
DC16:D.OP1/2 3.14 2155:A/1 2.58 ARG336:A.NE/1
DA17:D.OP1/2 2.91 2054:A/2 2.63 ASP128:A.OD2/2
DA17:D.OP1/2 2.91 2054:A/2 2.77 TYR129:A.O/2
DA17:D.OP1/2 2.73 2055:A/2 2.75 GLY131:A.N/2
DA17:D.OP1/2 2.73 2055:A/2 3.26 GLY131:A.O/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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