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Nucleic atom dist Protein atom
DT2:C.O2/1 2.93 ASN348:A.ND2/1
DT3:C.OP1/1 2.74 THR210:A.N/1
DT3:C.OP1/1 2.75 THR210:A.OG1/1
DT3:C.OP1/1 2.7 SER216:A.OG/1
DT3:C.O4'/1 3.17 ASN348:A.ND2/1
DG4:C.OP1/1 2.81 LEU113:A.N/1
DG4:C.OP1/1 2.78 ARG350:A.NE/1
DG4:C.OP2/1 3.02 ARG350:A.NH2/1
DG4:C.N2/1 3.29 GLY218:A.O/1
DT5:C.OP2/1 2.67 ARG114:A.NE/1
DT5:C.OP2/1 3.1 ARG114:A.NH2/1
DT5:C.O5'/1 3.2 ARG114:A.NH2/1
DC6:C.O2/1 2.84 ARG222:A.NE/1
DC6:C.O2/1 2.7 ARG222:A.NH2/1
DA7:C.OP2/1 2.69 SER258:A.OG/1
DA7:C.O4'/1 2.97 ARG222:A.NH2/1
DA7:C.O3'/1 2.91 ARG229:A.NH2/1
DT8:C.OP1/1 2.84 ARG229:A.NH1/1
DT8:C.OP2/1 2.74 GLY68:A.N/2
DT8:C.O2/1 2.99 ASN106:A.ND2/2
DG9:C.OP1/1 2.81 HIS374:A.NE2/2
DG9:C.OP2/1 3.04 ARG69:A.N/2
DG9:C.O4'/1 2.89 ASN106:A.ND2/2
DG10:C.OP1/1 2.73 SER373:A.OG/2
DG10:C.OP2/1 2.81 HIS374:A.N/2
DG10:C.O4'/1 3.43 LYS107:A.NZ/2
DG10:C.N7/1 2.38 ARG69:A.NH2/2
DG10:C.O6/1 3.22 ARG69:A.NH1/2
DG17:C.OP2/1 3.11 TYR28:A.OH/2
DC18:C.OP1/1 2.93 LYS26:A.N/2
DA6:D.O5'/1 3.13 ASN84:A.OD1/2
DT8:D.OP2/1 2.79 ARG86:A.NH1/2
DT8:D.OP2/1 3.15 ARG86:A.NH2/2
DT9:D.OP2/1 2.8 LYS262:A.NZ/1
DC11:D.O2/1 2.75 ARG313:A.NH1/2
DT13:D.OP1/1 2.57 SER311:A.OG/2
DC16:D.OP1/1 2.76 ARG336:A.NH2/2
DA17:D.OP2/1 2.66 LYS228:A.NZ/1
DT2:C.O2/2 2.93 ASN348:A.ND2/2
DT3:C.OP1/2 2.74 THR210:A.N/2
DT3:C.OP1/2 2.75 THR210:A.OG1/2
DT3:C.OP1/2 2.7 SER216:A.OG/2
DT3:C.O4'/2 3.17 ASN348:A.ND2/2
DG4:C.OP1/2 2.81 LEU113:A.N/2
DG4:C.OP1/2 2.78 ARG350:A.NE/2
DG4:C.OP2/2 3.02 ARG350:A.NH2/2
DG4:C.N2/2 3.29 GLY218:A.O/2
DT5:C.OP2/2 2.67 ARG114:A.NE/2
DT5:C.OP2/2 3.1 ARG114:A.NH2/2
DT5:C.O5'/2 3.2 ARG114:A.NH2/2
DC6:C.O2/2 2.84 ARG222:A.NE/2
DC6:C.O2/2 2.7 ARG222:A.NH2/2
DA7:C.OP2/2 2.69 SER258:A.OG/2
DA7:C.O4'/2 2.97 ARG222:A.NH2/2
DA7:C.O3'/2 2.91 ARG229:A.NH2/2
DT8:C.OP1/2 2.84 ARG229:A.NH1/2
DT8:C.OP2/2 2.74 GLY68:A.N/1
DT8:C.O2/2 2.99 ASN106:A.ND2/1
DG9:C.OP1/2 2.81 HIS374:A.NE2/1
DG9:C.OP2/2 3.04 ARG69:A.N/1
DG9:C.O4'/2 2.89 ASN106:A.ND2/1
DG10:C.OP1/2 2.73 SER373:A.OG/1
DG10:C.OP2/2 2.81 HIS374:A.N/1
DG10:C.O4'/2 3.43 LYS107:A.NZ/1
DG10:C.N7/2 2.38 ARG69:A.NH2/1
DG10:C.O6/2 3.22 ARG69:A.NH1/1
DG17:C.OP2/2 3.11 TYR28:A.OH/1
DC18:C.OP1/2 2.93 LYS26:A.N/1
DA6:D.O5'/2 3.13 ASN84:A.OD1/1
DT8:D.OP2/2 2.79 ARG86:A.NH1/1
DT8:D.OP2/2 3.15 ARG86:A.NH2/1
DT9:D.OP2/2 2.8 LYS262:A.NZ/2
DC11:D.O2/2 2.75 ARG313:A.NH1/1
DT13:D.OP1/2 2.57 SER311:A.OG/1
DC16:D.OP1/2 2.76 ARG336:A.NH2/1
DA17:D.OP2/2 2.66 LYS228:A.NZ/2
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Nucleic atom d_n2w water d_p2w Protein atom
DA1:C.N7/1 2.56 2202:A/1 2.69 ASN361:A.ND2/1
DT3:C.OP2/1 2.76 2114:A/1 2.93 SER216:A.O/1
DG4:C.OP2/1 2.88 2199:A/1 2.96 ARG350:A.O/1
DG4:C.OP2/1 2.88 2199:A/1 2.55 SER365:A.OG/1
DT5:C.OP1/1 2.63 2053:A/1 2.92 PRO115:A.O/1
DT5:C.OP2/1 2.67 2052:A/1 3.08 HIS304:A.NE2/1
DC6:C.OP1/1 2.75 2055:A/1 3.02 ARG117:A.NH2/1
DA7:C.OP1/1 2.55 2121:A/1 3.41 LYS223:A.NZ/1
DA7:C.OP2/1 2.7 2146:A/1 2.79 VAL260:A.N/1
DT8:C.OP1/1 2.94 2011:C/1 2.97 ALA65:A.O/2
DT8:C.OP1/1 2.73 2132:A/1 2.79 HIS66:A.O/2
DT8:C.OP1/1 2.73 2132:A/1 2.94 ASN103:A.ND2/2
DT8:C.OP2/1 2.77 2012:C/1 3.2 ALA71:A.N/2
DT8:C.O3'/1 2.75 2013:C/1 2.7 ASN103:A.ND2/2
DG9:C.OP1/1 2.46 2013:C/1 2.7 ASN103:A.ND2/2
DG9:C.N7/1 2.96 2016:C/1 3.17 GLU70:A.N/2
DG9:C.N2/1 2.95 2017:C/1 3.33 ARG313:A.NH1/2
DC18:C.OP1/1 2.83 2030:C/1 2.98 TYR20:A.OH/2
DA7:D.OP1/1 2.58 2025:A/2 2.7 TRP82:A.O/2
DA7:D.OP1/1 2.58 2025:A/2 3.11 MET85:A.N/2
DA12:D.N3/1 2.67 2038:A/2 2.73 ASN106:A.O/2
DA12:D.N3/1 2.67 2038:A/2 2.98 ARG313:A.NH1/2
DT13:D.O2/1 2.68 2018:D/1 2.62 SER105:A.O/2
DG14:D.OP1/1 2.86 2040:A/2 2.84 SER109:A.N/2
DA15:D.OP1/1 3.1 2037:A/2 2.82 SER105:A.N/2
DA15:D.OP1/1 3.17 2021:D/1 3.09 TRP337:A.NE1/2
DA15:D.N3/1 2.69 2124:A/1 2.6 SER225:A.OG/1
DA17:D.OP1/1 2.59 2071:A/1 2.96 ASP128:A.OD2/1
DA17:D.OP1/1 2.59 2071:A/1 2.67 TYR129:A.O/1
DA17:D.OP1/1 2.5 2072:A/1 2.69 GLY131:A.N/1
DA17:D.N6/1 3.06 2070:A/1 2.97 ASP128:A.OD1/1
DA17:D.N6/1 3.06 2070:A/1 2.86 TYR129:A.O/1
DA1:C.N7/2 2.56 2202:A/2 2.69 ASN361:A.ND2/2
DT3:C.OP2/2 2.76 2114:A/2 2.93 SER216:A.O/2
DG4:C.OP2/2 2.88 2199:A/2 2.96 ARG350:A.O/2
DG4:C.OP2/2 2.88 2199:A/2 2.55 SER365:A.OG/2
DT5:C.OP1/2 2.63 2053:A/2 2.92 PRO115:A.O/2
DT5:C.OP2/2 2.67 2052:A/2 3.08 HIS304:A.NE2/2
DC6:C.OP1/2 2.75 2055:A/2 3.02 ARG117:A.NH2/2
DA7:C.OP1/2 2.55 2121:A/2 3.41 LYS223:A.NZ/2
DA7:C.OP2/2 2.7 2146:A/2 2.79 VAL260:A.N/2
DT8:C.OP1/2 2.94 2011:C/2 2.97 ALA65:A.O/1
DT8:C.OP1/2 2.73 2132:A/2 2.79 HIS66:A.O/1
DT8:C.OP1/2 2.73 2132:A/2 2.94 ASN103:A.ND2/1
DT8:C.OP2/2 2.77 2012:C/2 3.2 ALA71:A.N/1
DT8:C.O3'/2 2.75 2013:C/2 2.7 ASN103:A.ND2/1
DG9:C.OP1/2 2.46 2013:C/2 2.7 ASN103:A.ND2/1
DG9:C.N7/2 2.96 2016:C/2 3.17 GLU70:A.N/1
DG9:C.N2/2 2.95 2017:C/2 3.33 ARG313:A.NH1/1
DC18:C.OP1/2 2.83 2030:C/2 2.98 TYR20:A.OH/1
DA7:D.OP1/2 2.58 2025:A/1 2.7 TRP82:A.O/1
DA7:D.OP1/2 2.58 2025:A/1 3.11 MET85:A.N/1
DA12:D.N3/2 2.67 2038:A/1 2.73 ASN106:A.O/1
DA12:D.N3/2 2.67 2038:A/1 2.98 ARG313:A.NH1/1
DT13:D.O2/2 2.68 2018:D/2 2.62 SER105:A.O/1
DG14:D.OP1/2 2.86 2040:A/1 2.84 SER109:A.N/1
DA15:D.OP1/2 3.1 2037:A/1 2.82 SER105:A.N/1
DA15:D.OP1/2 3.17 2021:D/2 3.09 TRP337:A.NE1/1
DA15:D.N3/2 2.69 2124:A/2 2.6 SER225:A.OG/2
DA17:D.OP1/2 2.59 2071:A/2 2.96 ASP128:A.OD2/2
DA17:D.OP1/2 2.59 2071:A/2 2.67 TYR129:A.O/2
DA17:D.OP1/2 2.5 2072:A/2 2.69 GLY131:A.N/2
DA17:D.N6/2 3.06 2070:A/2 2.97 ASP128:A.OD1/2
DA17:D.N6/2 3.06 2070:A/2 2.86 TYR129:A.O/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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