Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC6:C.OP1/1 2.75 ARG159:B.NH1/1
DC6:C.OP1/1 2.72 VAL242:B.N/1
DC6:C.OP2/1 2.86 GLN156:B.NE2/1
DC6:C.OP2/1 2.8 ARG159:B.NH2/1
DT7:C.OP2/1 3.13 SER257:B.N/1
DT7:C.OP2/1 2.84 SER257:B.OG/1
DT11:C.OP2/1 2.66 SER47:B.OG/1
DT11:C.OP2/1 2.44 ARG50:B.NH1/1
DA12:C.OP1/1 2.51 ARG81:B.NH2/1
DA12:C.N3/1 3.39 ARG282:B.NH1/1
DA12:C.N3/1 3.02 ARG282:B.NH2/1
DT13:C.OP2/1 2.92 ALA84:B.N/1
DT13:C.OP2/1 2.73 THR87:B.OG1/1
DA14:C.OP1/1 2.84 LYS132:B.N/1
DG15:C.OP1/1 3.18 TYR324:B.OH/1
DG15:C.O6/1 2.41 LYS86:B.NZ/1
DG15:C.N3/1 2.98 LYS201:B.NZ/1
DC16:C.OP1/1 2.85 LYS173:B.NZ/1
DC16:C.OP1/1 2.78 ARG292:B.NH2/1
DC16:C.OP2/1 2.69 TRP315:B.NE1/1
DT23:C.OP1/1 3.27 ARG118:B.NH1/1
DT23:C.OP2/1 3.17 SER38:A.N/1
DT23:C.OP2/1 2.44 THR41:A.OG1/1
DT23:C.O4/1 2.97 GLN90:A.NE2/1
DA24:C.OP2/1 2.75 HIS40:A.ND1/1
DT25:C.OP1/1 3.12 ALA175:A.N/1
DA26:C.OP1/1 2.81 SER287:A.OG/1
DA26:C.OP1/1 3.06 HIS289:A.N/1
DA26:C.OP2/1 2.72 GLU262:A.OE2/1
DA26:C.OP2/1 2.86 GLY288:A.N/1
DC27:C.OP1/1 2.69 TYR283:A.N/1
DG28:C.OP1/1 3.11 LYS276:A.NZ/1
DG28:C.N7/1 2.97 ARG259:A.NH2/1
DG28:C.O6/1 2.81 ARG259:A.NE/1
DT35:C.O5'/1 3.33 ASN245:A.ND2/1
DT35:C.O2/1 2.87 LYS244:A.NZ/1
DT3:D.O2/1 2.98 LYS244:A.NZ/1
DC6:D.OP1/1 2.66 ARG159:A.NH1/1
DC6:D.OP1/1 2.87 VAL242:A.N/1
DC6:D.OP2/1 3.19 ARG159:A.NH2/1
DT7:D.OP2/1 3 SER257:A.N/1
DT11:D.OP2/1 2.83 SER47:A.OG/1
DT11:D.OP2/1 3.35 ARG50:A.NE/1
DT11:D.OP2/1 2.64 ARG50:A.NH2/1
DA12:D.OP1/1 2.9 ARG81:A.NH2/1
DA12:D.N3/1 2.99 ARG282:A.NH2/1
DT13:D.OP2/1 2.99 ALA84:A.N/1
DT13:D.OP2/1 2.64 THR87:A.OG1/1
DT13:D.O4/1 3.31 GLN90:A.NE2/1
DA14:D.OP1/1 2.86 LYS132:A.N/1
DG15:D.OP1/1 2.84 TYR324:A.OH/1
DC16:D.OP1/1 3.1 LYS173:A.NZ/1
DC16:D.OP2/1 2.91 ARG292:A.NH2/1
DC16:D.OP2/1 2.95 TRP315:A.NE1/1
DA17:D.O5'/1 3.11 LYS201:A.NZ/1
DA17:D.O3'/1 3.32 LYS201:A.NZ/1
DT18:D.OP1/1 2.54 LYS201:A.O/1
DA19:D.OP1/1 2.68 ARG121:B.NH1/1
DG21:D.OP2/1 3.16 ARG106:B.NE/1
DG21:D.OP2/1 3.09 ARG106:B.NH2/1
DC22:D.OP1/1 2.92 ARG101:B.NH2/1
DC22:D.OP2/1 3.07 ARG100:B.NH1/1
DC22:D.OP2/1 3.19 ARG101:B.NE/1
DT23:D.OP1/1 3.08 ARG118:A.NH2/2
DT23:D.OP2/1 3.16 SER38:B.N/1
DT23:D.OP2/1 2.51 THR41:B.OG1/1
DT23:D.O4/1 3.05 GLN90:B.NE2/1
DT25:D.OP1/1 2.93 ALA175:B.N/1
DA26:D.OP1/1 2.79 SER287:B.OG/1
DA26:D.OP1/1 3.31 HIS289:B.N/1
DA26:D.OP2/1 2.58 GLU262:B.OE2/1
DA26:D.OP2/1 2.93 GLY288:B.N/1
DA26:D.O4'/1 3.34 ARG282:B.NH1/1
DC27:D.OP1/1 2.71 TYR283:B.N/1
DG28:D.OP1/1 3.2 LYS276:B.NZ/1
DG28:D.N7/1 2.94 ARG259:B.NH2/1
DG28:D.O6/1 2.81 ARG259:B.NE/1
DT35:D.O2/1 2.82 LYS244:B.NZ/1
DC6:C.OP1/2 2.75 ARG159:B.NH1/2
DC6:C.OP1/2 2.72 VAL242:B.N/2
DC6:C.OP2/2 2.86 GLN156:B.NE2/2
DC6:C.OP2/2 2.8 ARG159:B.NH2/2
DT7:C.OP2/2 3.13 SER257:B.N/2
DT7:C.OP2/2 2.84 SER257:B.OG/2
DT11:C.OP2/2 2.66 SER47:B.OG/2
DT11:C.OP2/2 2.44 ARG50:B.NH1/2
DA12:C.OP1/2 2.51 ARG81:B.NH2/2
DA12:C.N3/2 3.39 ARG282:B.NH1/2
DA12:C.N3/2 3.02 ARG282:B.NH2/2
DT13:C.OP2/2 2.92 ALA84:B.N/2
DT13:C.OP2/2 2.73 THR87:B.OG1/2
DA14:C.OP1/2 2.84 LYS132:B.N/2
DG15:C.OP1/2 3.18 TYR324:B.OH/2
DG15:C.O6/2 2.41 LYS86:B.NZ/2
DG15:C.N3/2 2.98 LYS201:B.NZ/2
DC16:C.OP1/2 2.85 LYS173:B.NZ/2
DC16:C.OP1/2 2.78 ARG292:B.NH2/2
DC16:C.OP2/2 2.69 TRP315:B.NE1/2
DT23:C.OP1/2 3.27 ARG118:B.NH1/2
DT23:C.OP2/2 3.17 SER38:A.N/2
DT23:C.OP2/2 2.44 THR41:A.OG1/2
DT23:C.O4/2 2.97 GLN90:A.NE2/2
DA24:C.OP2/2 2.75 HIS40:A.ND1/2
DT25:C.OP1/2 3.12 ALA175:A.N/2
DA26:C.OP1/2 2.81 SER287:A.OG/2
DA26:C.OP1/2 3.06 HIS289:A.N/2
DA26:C.OP2/2 2.72 GLU262:A.OE2/2
DA26:C.OP2/2 2.86 GLY288:A.N/2
DC27:C.OP1/2 2.69 TYR283:A.N/2
DG28:C.OP1/2 3.11 LYS276:A.NZ/2
DG28:C.N7/2 2.97 ARG259:A.NH2/2
DG28:C.O6/2 2.81 ARG259:A.NE/2
DT35:C.O5'/2 3.33 ASN245:A.ND2/2
DT35:C.O2/2 2.87 LYS244:A.NZ/2
DT3:D.O2/2 2.98 LYS244:A.NZ/2
DC6:D.OP1/2 2.66 ARG159:A.NH1/2
DC6:D.OP1/2 2.87 VAL242:A.N/2
DC6:D.OP2/2 3.19 ARG159:A.NH2/2
DT7:D.OP2/2 3 SER257:A.N/2
DT11:D.OP2/2 2.83 SER47:A.OG/2
DT11:D.OP2/2 3.35 ARG50:A.NE/2
DT11:D.OP2/2 2.64 ARG50:A.NH2/2
DA12:D.OP1/2 2.9 ARG81:A.NH2/2
DA12:D.N3/2 2.99 ARG282:A.NH2/2
DT13:D.OP2/2 2.99 ALA84:A.N/2
DT13:D.OP2/2 2.64 THR87:A.OG1/2
DT13:D.O4/2 3.31 GLN90:A.NE2/2
DA14:D.OP1/2 2.86 LYS132:A.N/2
DG15:D.OP1/2 2.84 TYR324:A.OH/2
DC16:D.OP1/2 3.1 LYS173:A.NZ/2
DC16:D.OP2/2 2.91 ARG292:A.NH2/2
DC16:D.OP2/2 2.95 TRP315:A.NE1/2
DA17:D.O5'/2 3.11 LYS201:A.NZ/2
DA17:D.O3'/2 3.32 LYS201:A.NZ/2
DT18:D.OP1/2 2.54 LYS201:A.O/2
DA19:D.OP1/2 2.68 ARG121:B.NH1/2
DG21:D.OP2/2 3.16 ARG106:B.NE/2
DG21:D.OP2/2 3.09 ARG106:B.NH2/2
DC22:D.OP1/2 2.92 ARG101:B.NH2/2
DC22:D.OP2/2 3.07 ARG100:B.NH1/2
DC22:D.OP2/2 3.19 ARG101:B.NE/2
DT23:D.OP1/2 3.08 ARG118:A.NH2/1
DT23:D.OP2/2 3.16 SER38:B.N/2
DT23:D.OP2/2 2.51 THR41:B.OG1/2
DT23:D.O4/2 3.05 GLN90:B.NE2/2
DT25:D.OP1/2 2.93 ALA175:B.N/2
DA26:D.OP1/2 2.79 SER287:B.OG/2
DA26:D.OP1/2 3.31 HIS289:B.N/2
DA26:D.OP2/2 2.58 GLU262:B.OE2/2
DA26:D.OP2/2 2.93 GLY288:B.N/2
DA26:D.O4'/2 3.34 ARG282:B.NH1/2
DC27:D.OP1/2 2.71 TYR283:B.N/2
DG28:D.OP1/2 3.2 LYS276:B.NZ/2
DG28:D.N7/2 2.94 ARG259:B.NH2/2
DG28:D.O6/2 2.81 ARG259:B.NE/2
DT35:D.O2/2 2.82 LYS244:B.NZ/2
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA4:C.N3/1 2.99 43:C/1 3.18 LYS244:B.N/1
DA5:C.OP1/1 2.89 65:C/1 3.01 LYS244:B.O/1
DA5:C.O3'/1 3 342:B/1 2.98 ARG241:B.NE/1
DA5:C.O3'/1 3 342:B/1 2.91 ARG241:B.NH2/1
DA5:C.N3/1 2.89 364:B/1 2.62 ARG241:B.NH2/1
DA12:C.OP2/1 2.72 38:C/1 2.77 HIS91:B.NE2/1
DA14:C.N7/1 2.52 85:C/1 3.18 LYS86:B.O/1
DA14:C.N6/1 3.03 85:C/1 3.18 LYS86:B.O/1
DG15:C.OP1/1 2.93 393:B/1 2.63 ALA134:B.N/1
DG15:C.OP2/1 2.5 48:C/1 2.9 LYS132:B.O/1
DA17:C.OP2/1 2.32 94:C/1 2.61 ASN317:B.ND2/1
DC22:C.OP1/1 2.66 64:C/1 3.09 ARG101:A.NE/1
DC22:C.OP2/1 2.51 37:C/1 2.68 GLY93:A.O/1
DT23:C.OP1/1 3.1 424:B/1 3 ARG118:B.NH2/1
DT23:C.OP1/1 3.1 424:B/1 2.99 ARG121:B.NH2/1
DA24:C.OP2/1 3.01 378:A/1 3.25 HIS40:A.N/1
DA24:C.N7/1 2.87 78:C/1 3.2 HIS40:A.O/1
DA24:C.N6/1 2.57 78:C/1 3.2 HIS40:A.O/1
DT25:C.OP2/1 2.83 39:C/1 3.01 THR258:A.OG1/1
DA26:C.OP1/1 3.16 349:A/1 2.82 TYR283:A.OH/1
DC27:C.OP1/1 2.93 345:A/1 2.82 LYS276:A.NZ/1
DC27:C.OP1/1 2.93 345:A/1 3.14 LEU284:A.N/1
DC27:C.N4/1 3.07 41:C/1 3.2 GLU262:A.OE1/1
DT32:C.O2/1 2.82 71:C/1 2.84 ARG241:A.NH1/1
DA34:C.O4'/1 2.84 393:A/1 2.48 ARG243:A.NH1/1
DA4:D.N3/1 3.12 350:A/1 2.96 LYS244:A.N/1
DA5:D.OP1/1 2.39 75:D/1 2.95 ARG243:A.O/1
DG15:D.OP1/1 2.81 36:D/1 2.85 ALA134:A.N/1
DG15:D.OP2/1 2.72 427:A/1 2.72 GLN133:A.NE2/1
DG15:D.N7/1 2.79 80:D/1 3.18 LYS86:A.NZ/1
DC16:D.OP2/1 2.37 45:D/1 2.78 ARG292:A.NE/1
DC16:D.OP2/1 2.37 45:D/1 2.98 ARG292:A.NH2/1
DC16:D.OP2/1 2.37 45:D/1 2.8 TYR324:A.OH/1
DA17:D.OP1/1 2.76 446:A/1 2.73 GLY314:A.O/1
DT20:D.OP2/1 2.72 399:B/1 2.45 SER108:B.OG/1
DG21:D.O6/1 2.91 55:D/1 3.04 LYS86:B.NZ/1
DA24:D.OP1/1 3.22 402:B/1 3 ARG179:B.NH2/1
DA24:D.OP2/1 2.88 489:B/1 2.84 ARG199:B.NH1/1
DA24:D.N7/1 2.77 43:D/1 2.93 HIS40:B.O/1
DA24:D.N6/1 2.85 43:D/1 2.93 HIS40:B.O/1
DT25:D.OP2/1 2.87 384:B/1 2.62 HIS40:B.NE2/1
DC27:D.OP1/1 2.64 37:D/1 2.73 LYS276:B.NZ/1
DC27:D.OP1/1 2.64 37:D/1 3.05 GLN281:B.O/1
DC27:D.OP1/1 2.64 37:D/1 3.28 LEU284:B.N/1
DC27:D.OP1/1 2.77 111:D/1 3.12 ALA285:B.N/1
DC27:D.OP1/1 2.77 111:D/1 3.05 ALA285:B.O/1
DC27:D.N4/1 2.98 361:B/1 2.9 GLU262:B.OE1/1
DT35:D.OP1/1 2.71 78:D/1 2.96 ASN245:B.OD1/1
DT35:D.OP1/1 2.39 64:D/1 2.98 ASN245:B.ND2/1
DA4:C.N3/2 2.99 43:C/2 3.18 LYS244:B.N/2
DA5:C.OP1/2 2.89 65:C/2 3.01 LYS244:B.O/2
DA5:C.O3'/2 3 342:B/2 2.98 ARG241:B.NE/2
DA5:C.O3'/2 3 342:B/2 2.91 ARG241:B.NH2/2
DA5:C.N3/2 2.89 364:B/2 2.62 ARG241:B.NH2/2
DA12:C.OP2/2 2.72 38:C/2 2.77 HIS91:B.NE2/2
DA14:C.N7/2 2.52 85:C/2 3.18 LYS86:B.O/2
DA14:C.N6/2 3.03 85:C/2 3.18 LYS86:B.O/2
DG15:C.OP1/2 2.93 393:B/2 2.63 ALA134:B.N/2
DG15:C.OP2/2 2.5 48:C/2 2.9 LYS132:B.O/2
DA17:C.OP2/2 2.32 94:C/2 2.61 ASN317:B.ND2/2
DC22:C.OP1/2 2.66 64:C/2 3.09 ARG101:A.NE/2
DC22:C.OP2/2 2.51 37:C/2 2.68 GLY93:A.O/2
DT23:C.OP1/2 3.1 424:B/2 3 ARG118:B.NH2/2
DT23:C.OP1/2 3.1 424:B/2 2.99 ARG121:B.NH2/2
DA24:C.OP2/2 3.01 378:A/2 3.25 HIS40:A.N/2
DA24:C.N7/2 2.87 78:C/2 3.2 HIS40:A.O/2
DA24:C.N6/2 2.57 78:C/2 3.2 HIS40:A.O/2
DT25:C.OP2/2 2.83 39:C/2 3.01 THR258:A.OG1/2
DA26:C.OP1/2 3.16 349:A/2 2.82 TYR283:A.OH/2
DC27:C.OP1/2 2.93 345:A/2 2.82 LYS276:A.NZ/2
DC27:C.OP1/2 2.93 345:A/2 3.14 LEU284:A.N/2
DC27:C.N4/2 3.07 41:C/2 3.2 GLU262:A.OE1/2
DT32:C.O2/2 2.82 71:C/2 2.84 ARG241:A.NH1/2
DA34:C.O4'/2 2.84 393:A/2 2.48 ARG243:A.NH1/2
DA4:D.N3/2 3.12 350:A/2 2.96 LYS244:A.N/2
DA5:D.OP1/2 2.39 75:D/2 2.95 ARG243:A.O/2
DG15:D.OP1/2 2.81 36:D/2 2.85 ALA134:A.N/2
DG15:D.OP2/2 2.72 427:A/2 2.72 GLN133:A.NE2/2
DG15:D.N7/2 2.79 80:D/2 3.18 LYS86:A.NZ/2
DC16:D.OP2/2 2.37 45:D/2 2.78 ARG292:A.NE/2
DC16:D.OP2/2 2.37 45:D/2 2.98 ARG292:A.NH2/2
DC16:D.OP2/2 2.37 45:D/2 2.8 TYR324:A.OH/2
DA17:D.OP1/2 2.76 446:A/2 2.73 GLY314:A.O/2
DT20:D.OP2/2 2.72 399:B/2 2.45 SER108:B.OG/2
DG21:D.O6/2 2.91 55:D/2 3.04 LYS86:B.NZ/2
DA24:D.OP1/2 3.22 402:B/2 3 ARG179:B.NH2/2
DA24:D.OP2/2 2.88 489:B/2 2.84 ARG199:B.NH1/2
DA24:D.N7/2 2.77 43:D/2 2.93 HIS40:B.O/2
DA24:D.N6/2 2.85 43:D/2 2.93 HIS40:B.O/2
DT25:D.OP2/2 2.87 384:B/2 2.62 HIS40:B.NE2/2
DC27:D.OP1/2 2.64 37:D/2 2.73 LYS276:B.NZ/2
DC27:D.OP1/2 2.64 37:D/2 3.05 GLN281:B.O/2
DC27:D.OP1/2 2.64 37:D/2 3.28 LEU284:B.N/2
DC27:D.OP1/2 2.77 111:D/2 3.12 ALA285:B.N/2
DC27:D.OP1/2 2.77 111:D/2 3.05 ALA285:B.O/2
DC27:D.N4/2 2.98 361:B/2 2.9 GLU262:B.OE1/2
DT35:D.OP1/2 2.71 78:D/2 2.96 ASN245:B.OD1/2
DT35:D.OP1/2 2.39 64:D/2 2.98 ASN245:B.ND2/2
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text