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Nucleic atom dist Protein atom
DT6:E.OP2/1 3.06 LYS340:B.NZ/1
DG7:E.OP1/1 2.92 THR302:B.N/1
DG7:E.OP2/1 2.67 THR302:B.OG1/1
DA8:E.OP2/1 2.7 GLY300:B.N/1
DT9:E.OP2/1 2.94 SER298:B.N/1
DG5:F.OP1/1 2.47 SER34:B.OG/1
DG5:F.OP1/1 3.04 ARG332:B.NH2/1
DG5:F.OP2/1 3.17 ARG332:B.NE/1
DG5:F.OP2/1 3.22 ARG333:B.NE/1
DG5:F.OP2/1 2.74 ARG333:B.NH2/1
DG6:F.OP2/1 2.59 THR251:B.OG1/1
DC7:F.OP2/1 2.43 ARG248:B.NH1/1
DC7:F.OP2/1 2.93 ILE249:B.N/1
DC7:F.OP2/1 3.18 ILE249:B.O/1
DC8:F.OP1/1 2.65 ARG243:B.NH1/1
DC8:F.OP1/1 2.88 ARG243:B.NH2/1
DC8:F.OP1/1 3.23 GLY247:B.N/1
DC8:F.OP2/1 3.04 GLY247:B.N/1
DG9:F.OP1/1 2.8 LYS244:B.N/1
DG9:F.OP2/1 2.53 SER245:B.OG/1
DG9:F.N7/1 2.93 ARG337:B.NH2/1
DG9:F.O6/1 2.92 ARG337:B.NH1/1
DA10:F.OP2/1 2.54 LYS244:B.NZ/1
DC12:F.OP2/1 3.13 ALA221:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG7:E.OP2/1 2.87 501:B/1 2.71 HIS286:B.NE2/1
DG7:E.N7/1 2.82 516:B/1 2.64 LYS340:B.NZ/1
DA8:E.OP2/1 3.22 687:B/1 2.78 HIS286:B.ND1/1
DA8:E.OP2/1 3.22 687:B/1 2.67 SER298:B.OG/1
DT9:E.OP1/1 2.54 118:E/1 3.29 ARG299:B.NH1/1
DT9:E.OP1/1 2.54 118:E/1 3.23 ARG299:B.NH2/1
DG12:E.OP1/1 2.58 117:E/1 3.15 LYS222:B.NZ/1
DG12:E.OP2/1 2.66 143:E/1 2.86 SER189:B.N/1
DC4:F.OP2/1 2.48 135:F/1 3.2 ARG332:B.NH2/1
DC4:F.O2/1 2.72 109:F/1 2.77 ARG333:B.NH2/1
DG6:F.OP1/1 2.54 102:F/1 2.71 TYR33:B.O/1
DG6:F.OP1/1 2.99 635:B/1 2.87 ARG248:B.NH1/1
DG6:F.OP1/1 2.61 105:F/1 2.93 THR251:B.N/1
DG6:F.OP2/1 2.65 103:F/1 2.91 ILE249:B.O/1
DG6:F.O5'/1 3.08 103:F/1 2.91 ILE249:B.O/1
DC8:F.OP1/1 2.77 138:F/1 3.06 GLY247:B.O/1
DC8:F.OP2/1 2.76 101:F/1 2.79 SER245:B.OG/1
DC8:F.OP2/1 2.76 101:F/1 2.93 ARG337:B.NE/1
DC12:F.OP1/1 2.67 125:F/1 2.85 THR218:B.O/1
DC12:F.OP1/1 2.67 125:F/1 2.83 LYS222:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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