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Nucleic atom dist Protein atom
DA6:D.OP2/1 2.97 LYS339:B.NZ/1
DA6:D.O5'/1 3.12 LYS339:B.NZ/1
DT7:D.OP2/1 2.48 THR301:B.OG1/1
DA8:D.OP2/1 2.77 GLY299:B.N/1
DC9:D.OP2/1 2.72 SER297:B.N/1
DA11:D.OP1/1 2.91 LYS193:B.NZ/1
DG12:D.OP1/1 2.65 GLY187:B.N/1
DG4:C.OP2/1 3.09 ARG331:B.NH2/1
DA5:C.OP1/1 2.92 THR250:B.OG1/1
DC6:C.OP1/1 2.68 ARG247:B.NH1/1
DC6:C.OP2/1 2.81 ILE248:B.N/1
DT7:C.OP1/1 2.88 ARG242:B.NH2/1
DT7:C.OP2/1 3.11 GLY246:B.N/1
DT7:C.OP2/1 3.32 ARG336:B.NH1/1
DG8:C.OP1/1 2.81 LYS243:B.N/1
DG8:C.OP2/1 2.98 SER244:B.N/1
DG8:C.OP2/1 3 SER244:B.OG/1
DG8:C.N7/1 3.31 ARG336:B.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC14:D.O2/1 2.3 102:D/1 2.83 TYR12:B.OH/1
DC14:D.N4/1 3.1 103:D/1 3.12 ALA57:B.O/1
DG4:C.OP2/1 2.95 563:B/1 2.68 THR250:B.OG1/1
DG8:C.OP1/1 3.1 526:B/1 2.48 VAL241:B.O/1
DG8:C.N7/1 3.26 585:B/1 2.48 ARG336:B.NE/1
DG8:C.N7/1 3.26 585:B/1 2.78 ARG336:B.NH2/1
DG8:C.O6/1 2.57 585:B/1 2.48 ARG336:B.NE/1
DG8:C.O6/1 2.57 585:B/1 2.78 ARG336:B.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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