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Nucleic atom dist Protein atom
DG2:W.O5'/1 3.14 ARG11:A.NH1/1
DG2:W.O5'/1 3.02 ARG50:A.NH1/1
DT3:W.OP2/1 2.7 SER44:A.N/1
DT3:W.OP2/1 2.65 SER44:A.OG/1
DA8:W.OP1/1 2.84 ARG31:C.NH1/1
DA8:W.OP1/1 2.86 LYS55:C.NZ/1
DA8:W.OP2/1 2.94 THR34:C.N/1
DC9:W.OP2/1 2.71 TYR49:C.OH/1
DC9:W.OP2/1 2.96 LYS55:C.N/1
DC9:W.N4/1 2.86 GLU45:C.OE2/1
DC11:W.O3'/1 3.14 ARG31:B.NH1/1
DA12:W.OP1/1 2.68 ARG31:B.NH1/1
DA12:W.OP1/1 2.52 LYS55:B.NZ/1
DA12:W.OP2/1 2.82 THR34:B.N/1
DC13:W.OP2/1 2.43 TYR49:B.OH/1
DC13:W.OP2/1 2.94 LYS55:B.N/1
DC13:W.N4/1 2.37 GLU45:B.OE2/1
DG23:Z.O5'/1 3.15 ARG50:C.NH1/1
DT24:Z.OP2/1 2.8 SER44:C.N/1
DT24:Z.OP2/1 2.82 SER44:C.OG/1
DA29:Z.OP1/1 3.29 ARG31:A.NE/1
DA29:Z.OP1/1 3.02 ARG31:A.NH2/1
DA29:Z.OP1/1 2.62 LYS55:A.NZ/1
DA29:Z.OP2/1 2.92 THR34:A.N/1
DC30:Z.OP2/1 2.75 TYR49:A.OH/1
DC30:Z.OP2/1 2.9 LYS55:A.N/1
DC30:Z.N4/1 2.95 GLU45:A.OE1/1
DA33:Z.OP1/1 2.84 ARG31:D.NE/1
DA33:Z.OP1/1 2.56 LYS55:D.NZ/1
DA33:Z.OP2/1 2.67 THR34:D.N/1
DC34:Z.OP2/1 2.45 TYR49:D.OH/1
DC34:Z.OP2/1 2.89 LYS55:D.N/1
DC34:Z.N4/1 2.52 GLU45:D.OE1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:W.O3'/1 2.7 115:W/1 3.38 LYS36:C.NZ/1
DA8:W.OP2/1 2.66 101:W/1 3.19 ALA35:C.N/1
DA8:W.N7/1 2.89 316:C/1 3.17 GLU45:C.OE2/1
DC9:W.OP1/1 3.14 286:C/1 2.6 THR56:C.N/1
DC9:W.OP1/1 3.14 286:C/1 2.45 THR56:C.OG1/1
DT10:W.OP2/1 2.62 282:C/1 2.61 PRO53:C.O/1
DA12:W.OP2/1 2.68 121:W/1 3.1 ALA35:B.N/1
DG25:Z.N7/1 3.42 103:Z/1 2.95 ALA46:C.N/1
DG25:Z.O6/1 2.92 103:Z/1 2.95 ALA46:C.N/1
DA26:Z.N6/1 3.38 103:Z/1 2.95 ALA46:C.N/1
DA29:Z.N7/1 2.9 250:A/1 2.42 GLU45:A.OE1/1
DC30:Z.OP1/1 2.76 218:A/1 2.94 THR56:A.N/1
DC30:Z.OP1/1 2.76 218:A/1 2.76 THR56:A.OG1/1
DT31:Z.OP2/1 2.69 253:A/1 2.63 PRO53:A.O/1
DA33:Z.OP2/1 2.74 121:Z/1 2.88 ALA35:D.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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