Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
G25:R.OP1/1 3.23 GLN390:C.OE1/1
C28:R.O3'/1 2.8 LYS838:C.NZ/1
U29:R.OP1/1 3.03 LYS838:C.NZ/1
U29:R.OP1/1 2.35 LYS846:C.NZ/1
U29:R.O3'/1 2.9 ASP743:D.OD2/1
DC13:T.OP2/1 2.97 LYS610:D.NZ/1
DC13:T.O2/1 3.23 ALA1089:D.O/1
DC13:T.N3/1 2.84 ASP1090:D.OD1/1
DA21:T.O3'/1 2.74 ARG388:C.NH1/1
DT22:T.OP1/1 2.29 ARG388:C.NH1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text