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Nucleic atom dist Protein atom
DC4:B.OP1/1 3.1 ARG331:A.NH2/1
DG6:B.OP2/1 2.86 ILE248:A.N/1
DA7:B.OP1/1 3.34 ARG242:A.NH1/1
DA7:B.OP2/1 2.96 GLY246:A.N/1
DA7:B.OP2/1 2.78 ARG336:A.NH2/1
DA8:B.OP1/1 3.01 ARG242:A.NH2/1
DA8:B.OP1/1 2.69 LYS243:A.N/1
DA8:B.OP2/1 3.08 SER244:A.OG/1
DT9:B.OP2/1 3.03 LYS243:A.NZ/1
DC11:B.OP1/1 2.56 ALA220:A.N/1
DA25:C.OP2/1 3.29 THR301:A.N/1
DA25:C.OP2/1 2.52 THR301:A.OG1/1
DG26:C.OP2/1 2.75 GLY299:A.N/1
DG27:C.OP2/1 2.88 SER297:A.N/1
DT30:C.OP1/1 2.92 GLY187:A.N/1
DT30:C.OP1/1 2.81 THR190:A.N/1
DT30:C.OP1/1 2.43 THR190:A.OG1/1
DT30:C.OP2/1 3.43 ILE189:A.N/1
DC31:C.OP1/1 2.87 GLY185:A.N/1
DC31:C.OP1/1 3.2 ILE186:A.N/1
DC32:C.OP1/1 2.93 LYS152:A.NZ/1
DC32:C.O3'/1 3.01 ASP105:A.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC4:B.O5'/1 2.2 103:B/1 2.95 ARG331:A.NE/1
DC4:B.O5'/1 2.2 103:B/1 2.8 ARG331:A.NH2/1
DC10:B.O3'/1 3.11 104:B/1 2.74 LYS221:A.N/1
DC11:B.OP1/1 2.59 104:B/1 2.74 LYS221:A.N/1
DA28:C.OP1/1 3.17 1118:A/1 2.69 ASP294:A.OD2/1
DC31:C.OP1/1 2.94 1103:A/1 2.48 ILE186:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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