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Nucleic atom dist Protein atom
DG12:E.OP1/1 3.18 ARG87:A.NE/1
DG12:E.OP1/1 3.23 ARG87:A.NH2/1
DG12:E.OP1/1 3.3 LYS93:A.NZ/1
DA13:E.OP1/1 2.99 LYS38:A.NZ/1
DA14:E.OP2/1 2.78 HIS74:A.NE2/1
DA14:E.O3'/1 3.12 HIS76:A.ND1/1
DT15:E.OP1/1 3.04 HIS76:A.ND1/1
DT15:E.OP2/1 2.69 ARG117:B.NH2/1
DT15:E.O3'/1 2.98 GLU433:C.OE1/1
DT15:E.O2/1 2.86 LYS458:C.N/1
DG2:F.O4'/1 3.08 ARG456:D.NH2/1
DT6:F.OP1/1 3.05 ASN473:C.ND2/1
DT7:F.OP1/1 2.94 ASN461:C.N/1
DT7:F.O3'/1 3.2 HIS513:C.NE2/1
DC8:F.OP1/1 2.85 HIS513:C.NE2/1
DC8:F.OP2/1 2.86 ASN461:C.ND2/1
DC8:F.OP2/1 3.02 LYS464:C.NZ/1
DC8:F.O5'/1 3.08 LYS464:C.NZ/1
DA9:F.OP1/1 2.87 GLY173:A.N/1
DA9:F.OP1/1 2.88 ARG629:C.NH1/1
DA9:F.OP2/1 3.18 LYS464:C.NZ/1
DA9:F.OP2/1 2.74 ARG629:C.NH1/1
DT10:F.OP1/1 2.82 ARG630:C.NH2/1
DG12:G.OP1/1 2.83 ARG87:B.NE/1
DG12:G.OP1/1 2.98 LYS93:B.NZ/1
DC13:G.OP1/1 2.95 LYS38:B.NZ/1
DA14:G.OP2/1 2.74 HIS74:B.NE2/1
DA14:G.O3'/1 3.26 HIS76:B.ND1/1
DT15:G.OP1/1 3.18 HIS76:B.ND1/1
DT15:G.OP2/1 2.87 ARG117:A.NH2/1
DT15:G.O2/1 3.01 LYS458:D.N/1
DG1:H.OP2/1 3.04 SER436:C.N/1
DT6:H.OP1/1 3.21 ASN473:D.ND2/1
DG7:H.OP1/1 2.75 ASN461:D.N/1
DC8:H.OP1/1 2.86 HIS513:D.NE2/1
DC8:H.OP2/1 2.52 ASN461:D.ND2/1
DC8:H.OP2/1 2.67 LYS464:D.NZ/1
DC8:H.O3'/1 3.14 SER171:B.O/1
DA9:H.OP1/1 2.92 GLY173:B.N/1
DA9:H.OP1/1 2.91 ARG629:D.NH1/1
DA9:H.OP2/1 3.31 LYS464:D.NZ/1
DA9:H.OP2/1 3.08 ARG629:D.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA14:G.OP1/1 2.77 606:B/1 3.18 TYR23:B.OH/1
DA14:G.OP1/1 2.99 602:B/1 3.18 ARG28:B.O/1
DA14:G.OP1/1 2.77 606:B/1 2.75 ARG28:B.NE/1
DA14:G.OP1/1 2.99 602:B/1 2.76 VAL40:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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