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Nucleic atom dist Protein atom
DG1:G.OP2/1 2.89 LYS277:B.NZ/1
DT2:G.OP1/1 3.01 LYS197:B.NZ/1
DT2:G.OP2/1 2.89 HIS278:B.NE2/1
DT3:G.OP1/1 2.89 LYS274:B.NZ/1
DC4:H.OP1/1 2.75 ILE329:B.N/1
DT5:H.OP1/1 2.9 LYS276:B.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1:G.OP1/1 2.74 106:G/1 3.12 SER281:B.OG/1
DG1:G.OP1/1 2.74 106:G/1 3.08 SER281:B.OG/1
DT2:G.OP1/1 2.44 105:G/1 2.61 CYS272:B.O/1
DT2:G.OP2/1 2.72 111:G/1 3.37 HIS278:B.NE2/1
DT5:H.OP2/1 2.83 109:H/1 2.89 LYS276:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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