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Nucleic atom dist Protein atom
DC20:I.OP1/1 2.92 LYS56:E.NZ/1
DA30:I.OP1/1 2.89 SER52:D.OG/1
DA30:I.OP1/1 3.07 SER53:D.N/1
DA30:I.OP2/1 2.74 SER53:D.OG/1
DA30:I.O3'/1 2.57 ARG76:C.NH1/1
DT37:I.O3'/1 3.24 ARG30:D.NH2/1
DC38:I.O4'/1 2.93 ARG30:D.NH1/1
DT41:I.OP1/1 3.27 ARG16:C.N/1
DT42:I.OP1/1 3.01 LYS14:C.O/1
DG50:I.OP1/1 3.11 SER84:D.N/1
DG50:I.OP1/1 2.81 THR85:D.OG1/1
DG50:I.OP2/1 3.35 SER84:D.N/1
DA51:I.OP2/1 2.79 ARG83:D.NH2/1
DG60:I.O3'/1 2.78 PHE84:A.O/1
DC61:I.OP1/1 3.02 PHE84:A.N/1
DC61:I.O5'/1 3.43 ARG83:A.NH1/1
DA70:I.O3'/1 3.33 ARG63:A.NE/1
DA71:I.OP1/1 2.72 ARG36:B.NH1/1
DA71:I.OP2/1 2.39 ARG36:B.NH2/1
DA79:I.OP1/1 2.95 ARG42:A.NH1/1
DG81:I.OP1/1 2.68 VAL117:A.N/1
DG81:I.OP1/1 2.93 THR118:A.OG1/1
DG86:I.O3'/1 3.13 GLN48:U.OE1/1
DT87:I.OP1/1 2.98 SER46:U.OG/1
DC91:I.OP1/1 3.01 SER47:F.OG/1
DC92:I.OP1/1 3 ILE46:F.N/1
DC92:I.O3'/1 3.34 GLY44:E.N/1
DG93:I.OP1/1 2.94 GLY44:E.N/1
DG93:I.OP1/1 3.23 ALA47:E.N/1
DG93:I.N3/1 2.94 ARG40:E.NH1/1
DA101:I.OP1/1 3.11 ARG69:E.NH2/1
DA101:I.OP2/1 2.94 ARG69:E.NH1/1
DC102:I.OP1/1 2.89 ARG63:E.NE/1
DC102:I.OP1/1 3.16 LYS64:E.N/1
DC102:I.OP2/1 2.82 LEU65:E.N/1
DG110:I.O3'/1 2.54 ARG83:E.NH2/1
DG112:I.OP1/1 3.06 LYS79:F.N/1
DG112:I.OP1/1 2.82 THR80:F.N/1
DG112:I.OP1/1 2.77 THR80:F.OG1/1
DT122:I.OP2/1 3.44 ALA44:G.N/1
DA123:I.OP1/1 2.79 VAL42:G.N/1
DA123:I.OP2/1 2.45 ARG34:G.NH2/1
DG132:I.OP1/1 2.88 TYR37:H.OH/1
DC133:I.OP1/1 2.31 ARG28:G.NH2/1
DC133:I.OP1/1 2.98 SER33:H.N/1
DC133:I.OP1/1 3.21 SER33:H.O/1
DA134:I.OP1/1 2.81 LYS31:H.N/1
DG142:I.OP1/1 3.32 THR75:G.N/1
DG142:I.OP1/1 2.97 ARG76:G.N/1
DC154:I.OP1/1 2.68 THR45:A.OG1/1
DG162:I.OP2/1 2.97 HIS25:U.NE2/1
DT163:I.OP2/1 3.19 TYR28:U.N/1
DC30:J.OP1/1 2.7 SER53:H.N/1
DC30:J.OP2/1 2.63 SER53:H.OG/1
DA31:J.OP1/1 2.91 ARG76:G.NH1/1
DA31:J.OP1/1 2.85 TYR39:H.OH/1
DG40:J.OP2/1 2.85 ARG31:G.NE/1
DG49:J.O3'/1 3.32 ARG41:G.NH1/1
DA50:J.OP1/1 2.97 SER84:H.N/1
DA50:J.OP1/1 2.82 THR85:H.OG1/1
DT61:J.OP1/1 3.22 PHE84:E.N/1
DA71:J.OP1/1 2.83 ARG36:F.NH1/1
DA71:J.OP2/1 2.98 ARG36:F.NH2/1
DG76:J.N2/1 3.19 ARG40:E.NH2/1
DA81:J.OP1/1 2.88 VAL117:E.N/1
DA81:J.OP1/1 2.96 THR118:E.N/1
DA81:J.OP1/1 2.89 THR118:E.OG1/1
DG84:J.N2/1 3.3 SER90:U.OG/1
DG86:J.OP1/1 2.82 ARG73:U.NH1/1
DC91:J.OP1/1 2.9 SER47:B.OG/1
DC91:J.OP2/1 3.19 GLY48:B.N/1
DG92:J.OP1/1 2.75 ILE46:B.N/1
DG92:J.OP2/1 3.08 ARG35:B.NH1/1
DG92:J.O3'/1 3.32 GLY44:A.N/1
DG92:J.N2/1 3.21 ARG40:A.NH2/1
DT93:J.OP1/1 2.94 GLY44:A.N/1
DT93:J.OP1/1 2.86 ALA47:A.N/1
DT93:J.O2/1 2.74 ARG40:A.NH1/1
DG94:J.O4'/1 3.11 ARG40:A.NH1/1
DA101:J.OP1/1 2.7 ARG69:A.NH2/1
DA101:J.OP2/1 2.87 ARG69:A.NH1/1
DG102:J.OP1/1 3.12 LYS64:A.N/1
DG102:J.OP2/1 2.88 LEU65:A.N/1
DA112:J.OP1/1 2.4 LYS79:B.N/1
DA112:J.OP1/1 2.75 THR80:B.N/1
DA123:J.OP1/1 2.58 VAL42:C.N/1
DA123:J.OP2/1 3.37 ARG34:C.NE/1
DA123:J.OP2/1 2.83 ARG34:C.NH2/1
DG132:J.OP1/1 3.07 TYR37:D.OH/1
DC133:J.OP1/1 2.46 ARG28:C.NH2/1
DC133:J.OP1/1 3.31 SER33:D.N/1
DC133:J.OP1/1 3.04 SER33:D.O/1
DG134:J.OP1/1 2.48 LYS31:D.N/1
DC142:J.OP1/1 3.14 THR75:C.N/1
DC142:J.OP1/1 2.71 ARG76:C.N/1
DC154:J.OP1/1 2.99 THR45:E.OG1/1
DC164:J.OP1/1 2.8 ARG94:U.NH1/1
DG166:J.O6/1 3.18 LYS97:U.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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