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Nucleic atom dist Protein atom
DA7:E.OP1/1 3.12 THR301:D.N/1
DA7:E.OP2/1 2.55 THR301:D.OG1/1
DG8:E.OP2/1 2.9 GLY299:D.N/1
DT12:E.OP1/1 2.78 GLY187:D.N/1
DT12:E.OP1/1 3.19 THR190:D.N/1
DT12:E.OP1/1 2.29 THR190:D.OG1/1
DT12:E.OP2/1 3.44 ILE189:D.N/1
DG5:F.OP2/1 3.02 ARG331:D.NH2/1
DA7:F.OP2/1 2.87 ILE248:D.N/1
DG8:F.OP2/1 2.95 GLY246:D.N/1
DG8:F.OP2/1 3.01 ARG336:D.NH1/1
DG8:F.OP2/1 3.01 ARG336:D.NH2/1
DG8:F.O5'/1 3.46 ARG336:D.NH1/1
DT9:F.OP1/1 2.98 LYS243:D.N/1
DT9:F.OP2/1 2.68 SER244:D.OG/1
DT12:F.OP1/1 3.27 ALA220:D.N/1
DOC101:E.OP1/1 2.52 GLY185:D.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:F.O5'/1 2.85 106:F/1 3.25 GLY41:D.N/1
DG5:F.OP1/1 2.4 552:D/1 2.18 SER34:D.OG/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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