Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC6:C.OP2/1 2.85 THR301:A.OG1/1
DA7:C.OP2/1 2.8 GLY299:A.N/1
DG8:C.OP2/1 2.97 SER297:A.N/1
DC11:C.OP1/1 2.8 GLY187:A.N/1
DC11:C.OP1/1 3.02 THR190:A.N/1
DC11:C.OP1/1 2.74 THR190:A.OG1/1
DT12:C.OP1/1 2.84 GLY185:A.N/1
DC13:C.OP1/1 2.76 LYS152:A.NZ/1
DC13:C.O3'/1 2.99 SER103:A.OG/1
DC13:C.O3'/1 2.93 ASP105:A.OD2/1
DA4:D.OP1/1 3.08 GLY41:A.N/1
DG5:D.OP1/1 2.92 ARG331:A.NH2/1
DG6:D.OP2/1 2.63 THR250:A.OG1/1
DG6:D.OP2/1 3.19 ARG332:A.NE/1
DG6:D.OP2/1 3.3 ARG332:A.NH2/1
DA7:D.OP1/1 3.31 ARG247:A.NH1/1
DA7:D.OP2/1 2.77 ILE248:A.N/1
DG8:D.OP2/1 2.83 GLY246:A.N/1
DG8:D.OP2/1 2.76 ARG336:A.NH1/1
DG8:D.OP2/1 3.04 ARG336:A.NH2/1
DT9:D.OP1/1 2.66 LYS243:A.N/1
DT9:D.OP2/1 2.69 SER244:A.OG/1
DT12:D.OP1/1 2.81 ALA220:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA5:C.OP1/1 2.86 930:A/1 2.58 LYS339:A.NZ/1
DA7:C.OP1/1 2.74 104:C/1 3.31 GLY299:A.N/1
DA7:C.OP1/1 2.74 104:C/1 2.75 GLY299:A.O/1
DA7:C.OP1/1 2.74 104:C/1 3.06 LYS321:A.NZ/1
DA7:C.OP2/1 2.92 858:A/1 2.72 SER297:A.OG/1
DG8:C.OP1/1 2.68 1000:A/1 2.75 ARG298:A.NH1/1
DG8:C.OP1/1 2.68 1000:A/1 2.45 ARG298:A.NH2/1
DC13:C.OP1/1 2.75 120:C/1 3.08 ASP156:A.OD1/1
DC13:C.OP1/1 2.75 120:C/1 3.09 ASP156:A.OD2/1
DC13:C.O3'/1 2.28 111:C/1 2.82 SER103:A.OG/1
DA4:D.OP1/1 3.06 848:A/1 2.4 ASP39:A.O/1
DA4:D.OP1/1 3.06 848:A/1 2.93 VAL62:A.N/1
DG6:D.OP1/1 2.78 105:D/1 3.04 THR250:A.N/1
DA7:D.OP2/1 2.92 111:D/1 3.19 ARG336:A.NH1/1
DT12:D.OP1/1 2.85 806:A/1 2.92 ILE217:A.O/1
DT12:D.OP1/1 2.85 806:A/1 2.8 LYS221:A.N/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text