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Nucleic atom dist Protein atom
DT1:E.OP1/1 3.08 GLU63:D.OE2/1
DG3:E.OP2/1 2.66 SER34:D.OG/1
DG3:E.O5'/1 2.66 SER34:D.OG/1
DC4:E.OP1/1 2.98 ARG331:D.NH2/1
DC4:E.OP2/1 2.85 THR250:D.OG1/1
DC4:E.OP2/1 3.12 ARG332:D.NE/1
DC4:E.OP2/1 3 ARG332:D.NH2/1
DG6:E.OP2/1 3.01 LYS78:D.NZ/1
DA7:E.OP1/1 2.67 ARG247:D.NH1/1
DA7:E.OP2/1 3.14 ILE248:D.N/1
DC8:E.OP1/1 2.96 ARG242:D.NH1/1
DC8:E.OP2/1 2.96 GLY246:D.N/1
DC8:E.OP2/1 3.17 ARG336:D.NH2/1
DT9:E.OP1/1 2.6 LYS243:D.N/1
DT9:E.OP2/1 2.78 SER244:D.OG/1
DG10:E.OP2/1 2.68 LYS243:D.NZ/1
DT6:F.OP2/1 3.18 THR301:D.N/1
DA7:F.OP2/1 2.76 GLY299:D.N/1
DC8:F.OP2/1 2.91 SER297:D.N/1
DC8:F.OP2/1 3.22 SER297:D.O/1
DG11:F.OP1/1 2.72 LYS193:D.NZ/1
DT12:F.OP1/1 2.81 GLY187:D.N/1
DT12:F.OP1/1 3.01 THR190:D.N/1
DT12:F.OP1/1 2.56 THR190:D.OG1/1
DC13:F.OP1/1 2.91 GLY185:D.N/1
DC13:F.O3'/1 2.82 LYS152:D.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:E.OP2/1 2.94 523:D/1 2.82 TYR12:D.OH/1
DG11:E.OP1/1 2.97 535:D/1 2.82 LYS221:D.N/1
DT12:F.OP2/1 2.99 560:D/1 2.61 ILE189:D.N/1
DC13:F.OP1/1 2.71 506:D/1 2.76 ALA181:D.O/1
DC13:F.OP1/1 2.71 506:D/1 2.66 VAL183:D.O/1
DC13:F.OP1/1 2.71 506:D/1 2.76 ILE186:D.O/1
DC13:F.OP2/1 2.65 101:F/1 3.14 ILE186:D.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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