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Nucleic atom dist Protein atom
DG6:T.N2/1 2.76 TYR268:A.OH/1
DC9:T.O2/1 3.19 LYS232:A.NZ/1
DC10:T.OP1/1 2.96 THR231:A.N/1
DC10:T.OP1/1 2.93 LYS232:A.N/1
DA11:T.OP1/1 2.89 LYS228:A.N/1
DG8:P.OP1/1 3.1 GLY107:A.N/1
DG8:P.OP1/1 2.85 ALA110:A.N/1
DG8:P.OP2/1 3.06 SER109:A.N/1
DG9:P.OP1/1 2.77 GLY105:A.N/1
DC10:P.OP1/1 2.88 ARG251:A.NH2/1
DG1:D.OP1/1 2.79 LYS68:A.NZ/1
DG1:D.OP2/1 3.15 LYS68:A.NZ/1
DT2:D.OP1/1 2.88 GLY66:A.N/1
DT2:D.OP1/1 2.87 ILE69:A.N/1
DT2:D.OP2/1 3.04 LYS68:A.N/1
DG3:D.OP1/1 2.85 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC10:T.OP2/1 2.78 108:T/1 2.96 GLU230:A.N/1
DA11:T.O3'/1 3.15 112:T/1 2.96 HIS135:A.N/1
DT12:T.OP1/1 2.54 106:T/1 2.97 HIS134:A.N/1
DT12:T.OP1/1 2.8 112:T/1 2.96 HIS135:A.N/1
DG7:P.OP1/1 2.7 122:P/1 2.81 SER109:A.OG/1
DG8:P.N2/1 3.37 115:P/1 3.03 LYS232:A.NZ/1
DG9:P.N3/1 2.91 115:P/1 3.03 LYS232:A.NZ/1
DC10:P.OP1/1 2.81 577:A/1 2.61 SER104:A.OG/1
DC10:P.OP1/1 2.61 109:P/1 2.65 ASP190:A.OD2/1
DC10:P.OP1/1 2.81 577:A/1 2.89 ARG251:A.NE/1
DG1:D.OP1/1 2.67 101:D/1 2.98 LYS35:A.NZ/1
DG1:D.OP2/1 2.69 102:D/1 2.88 LYS72:A.NZ/1
DG3:D.OP2/1 2.8 106:D/1 3.31 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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