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Nucleic atom dist Protein atom
DC6:T.OP2/1 2.77 LYS280:A.NZ/1
DC6:T.O2/1 2.86 ARG283:A.NH1/1
DG7:T.OP1/1 2.61 THR292:A.OG1/1
DC8:T.OP1/1 3.02 ASN294:A.ND2/1
DG9:T.OP1/1 2.69 TYR296:A.OH/1
DC10:T.OP1/1 2.99 THR233:A.N/1
DC10:T.OP1/1 2.96 LYS234:A.N/1
DA11:T.OP1/1 3.06 LYS230:A.N/1
DC8:P.OP1/1 3.12 GLY107:A.N/1
DC8:P.OP1/1 2.88 ALA110:A.N/1
DC8:P.OP2/1 2.97 SER109:A.N/1
DG9:P.OP1/1 2.76 GLY105:A.N/1
DC10:P.OP1/1 2.77 ARG254:A.NH2/1
DC10:P.OP1/1 2.84 ARG254:A.NH2/1
DC10:P.O2/1 2.93 TYR271:A.OH/1
DC10:P.O2/1 2.85 TYR271:A.OH/1
DG1:D.OP1/1 2.71 LYS68:A.NZ/1
DT2:D.OP1/1 2.79 GLY66:A.N/1
DT2:D.OP1/1 2.94 ILE69:A.N/1
DT2:D.OP2/1 3.15 LYS68:A.N/1
DC3:D.OP1/1 2.92 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC6:T.N4/1 3.27 104:T/1 3.07 ASN37:A.ND2/1
DC6:T.N4/1 2.86 104:T/1 3.07 ASN37:A.ND2/1
DG7:T.OP1/1 2.75 107:T/1 2.93 ARG283:A.O/1
DG7:T.OP1/1 2.75 107:T/1 2.89 ILE293:A.N/1
DG7:T.N2/1 3.12 639:A/1 3.36 ARG258:A.NH1/1
DG7:T.N2/1 3.29 580:A/1 2.76 ARG283:A.NH1/1
DG7:T.N2/1 3.29 580:A/1 2.58 GLU295:A.OE1/1
DG7:T.N2/1 3.12 639:A/1 2.8 GLU295:A.OE2/1
DG7:T.N3/1 2.85 580:A/1 2.76 ARG283:A.NH1/1
DG7:T.N3/1 2.85 580:A/1 3.14 ARG283:A.NH2/1
DG7:T.N3/1 2.85 580:A/1 2.58 GLU295:A.OE1/1
DC8:T.O2/1 3 639:A/1 2.8 GLU295:A.OE2/1
DG9:T.N2/1 3.13 593:A/1 3.19 SER229:A.OG/1
DG9:T.N2/1 3.13 593:A/1 2.69 LYS234:A.NZ/1
DC10:T.OP2/1 2.63 102:T/1 3.05 GLU232:A.N/1
DC10:T.OP2/1 2.63 102:T/1 3.03 GLU232:A.N/1
DC10:T.OP2/1 2.8 128:T/1 2.83 THR233:A.OG1/1
DA11:T.OP1/1 3 114:T/1 3.03 LYS230:A.O/1
DA11:T.OP2/1 2.57 116:T/1 2.95 LYS230:A.O/1
DT12:T.OP1/1 2.52 108:T/1 3.05 HIS134:A.N/1
DT12:T.OP1/1 2.88 103:T/1 3.1 HIS135:A.N/1
DG9:P.OP1/1 2.38 564:A/1 2.33 THR101:A.O/1
DG9:P.OP1/1 2.38 564:A/1 2.53 VAL103:A.O/1
DG9:P.OP1/1 2.38 564:A/1 2.39 ILE106:A.O/1
DG9:P.OP2/1 2.56 207:P/1 3.09 THR101:A.O/1
DC10:P.OP1/1 3.06 599:A/1 2.82 SER104:A.OG/1
DC10:P.OP1/1 3.02 202:P/1 2.69 ASP190:A.OD2/1
DC10:P.OP1/1 3.06 599:A/1 2.84 ARG254:A.NE/1
DC10:P.OP1/1 3.15 599:A/1 2.82 SER104:A.OG/1
DC10:P.OP1/1 2.95 202:P/1 2.69 ASP190:A.OD2/1
DC10:P.OP1/1 3.15 599:A/1 2.84 ARG254:A.NE/1
DG1:D.OP1/1 2.98 608:A/1 2.8 TYR39:A.OH/1
DG1:D.OP1/1 2.98 608:A/1 2.73 LYS72:A.NZ/1
DC3:D.OP1/1 2.66 570:A/1 2.51 LYS60:A.O/1
DC3:D.OP1/1 2.66 570:A/1 2.37 LEU62:A.O/1
DC3:D.OP1/1 2.66 570:A/1 2.4 VAL65:A.O/1
DC3:D.OP2/1 2.8 102:D/1 2.96 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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