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Nucleic atom dist Protein atom
DG5:M.N7/1 2.87 ARG329:B.NH1/1
DG5:M.O6/1 2.74 ARG329:B.NH2/1
DA6:M.OP1/1 2.79 GLN318:B.NE2/1
DA6:M.N7/1 3.02 ASN325:B.ND2/1
DA6:M.N6/1 3.13 ASN325:B.OD1/1
DA6:M.N6/1 3.42 ARG329:B.NH2/1
DG9:M.OP2/1 2.62 LYS305:A.NZ/1
DC10:M.OP1/1 2.85 TYR299:A.OH/1
DC10:M.OP2/1 2.82 ARG327:A.NE/1
DC10:M.OP2/1 2.85 ARG327:A.NH2/1
DG12:M.N7/1 3.02 ARG328:A.NH1/1
DG12:M.O6/1 2.7 ARG328:A.NH2/1
DT13:M.O4/1 3.36 ARG328:A.NH2/1
DG25:L.N7/1 2.87 ARG329:A.NH1/1
DG25:L.O6/1 2.78 ARG329:A.NH2/1
DA26:L.OP1/1 2.89 GLN318:A.NE2/1
DA26:L.N7/1 3.03 ASN325:A.ND2/1
DA26:L.N6/1 3.12 ASN325:A.OD1/1
DA26:L.N6/1 3.52 ARG329:A.NH2/1
DG29:L.OP2/1 2.6 LYS305:B.NZ/1
DC30:L.OP1/1 2.91 TYR299:B.OH/1
DC30:L.OP2/1 2.78 ARG327:B.NH1/1
DG32:L.N7/1 3.02 ARG328:B.NH1/1
DG32:L.O6/1 2.73 ARG328:B.NH2/1
DT33:L.O4/1 3.4 ARG328:B.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG5:M.OP1/1 2.6 211:M/1 2.73 THR284:B.OG1/1
DG5:M.OP2/1 3.02 448:B/1 3 TRP322:B.O/1
DG5:M.OP2/1 2.92 439:B/1 2.87 ASN325:B.ND2/1
DG5:M.OP2/1 2.8 426:B/1 2.79 ARG329:B.NH1/1
DA6:M.OP2/1 2.69 221:M/1 2.96 GLN318:B.O/1
DA6:M.OP2/1 2.9 431:B/1 2.81 ASN321:B.ND2/1
DC7:M.OP2/1 2.79 234:M/1 2.94 ASN321:B.ND2/1
DC7:M.N4/1 2.91 245:M/1 3.2 ASN321:B.O/1
DG9:M.OP1/1 2.75 226:M/1 2.79 PRO300:A.O/1
DC10:M.OP2/1 2.89 418:A/1 2.77 ILE324:A.O/1
DT11:M.OP2/1 2.85 237:M/1 3.28 ARG328:A.NH1/1
DT13:M.O4/1 2.75 225:M/1 3.14 ARG329:A.NH2/1
DG25:L.OP1/1 2.52 203:L/1 2.85 THR284:A.OG1/1
DG25:L.OP1/1 2.52 203:L/1 2.76 TRP322:A.NE1/1
DG25:L.OP2/1 2.87 239:L/1 2.9 ASN325:A.ND2/1
DG25:L.OP2/1 2.8 228:L/1 2.91 ARG329:A.NH1/1
DA26:L.OP2/1 2.78 420:A/1 2.78 GLN318:A.O/1
DA26:L.OP2/1 2.86 419:A/1 2.77 ASN321:A.ND2/1
DA26:L.O5'/1 3.17 419:A/1 2.77 ASN321:A.ND2/1
DC27:L.OP2/1 2.9 434:A/1 2.9 ASN321:A.ND2/1
DC27:L.N4/1 2.93 248:L/1 3.18 ASN321:A.O/1
DG29:L.OP1/1 2.76 420:B/1 2.76 PRO300:B.O/1
DC30:L.OP2/1 2.9 427:B/1 2.8 ILE324:B.O/1
DT31:L.OP2/1 2.43 201:L/1 3.21 ARG328:B.NH1/1
DT31:L.O5'/1 3.02 201:L/1 3.21 ARG328:B.NH1/1
DT33:L.O4/1 2.85 237:L/1 3.02 ARG329:B.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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