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Nucleic atom dist Protein atom
DT2:C.O2/1 2.7 ASN348:A.ND2/1
DT3:C.OP1/1 2.79 THR210:A.N/1
DT3:C.OP1/1 2.87 THR210:A.OG1/1
DT3:C.OP1/1 2.69 SER216:A.OG/1
DT3:C.O4'/1 3.32 ASN348:A.ND2/1
DG4:C.OP1/1 2.79 LEU113:A.N/1
DG4:C.OP1/1 2.72 ARG350:A.NE/1
DG4:C.OP2/1 3.12 ARG350:A.NH2/1
DG4:C.N2/1 3.29 GLY218:A.O/1
DT5:C.OP2/1 2.73 ARG114:A.NE/1
DT5:C.OP2/1 3.18 ARG114:A.NH2/1
DT5:C.O5'/1 3.4 ARG114:A.NH2/1
DC6:C.O2/1 2.89 ARG222:A.NE/1
DC6:C.O2/1 2.93 ARG222:A.NH2/1
DA7:C.OP2/1 2.69 SER258:A.OG/1
DA7:C.O4'/1 2.8 ARG222:A.NH2/1
DA7:C.O3'/1 2.88 ARG229:A.NH2/1
DT8:C.OP1/1 2.81 ARG229:A.NH1/1
DT8:C.OP2/1 3 GLY68:A.N/2
DT8:C.O2/1 2.84 ASN106:A.ND2/2
DG9:C.OP1/1 3.01 HIS374:A.NE2/2
DG9:C.OP2/1 3.1 ARG69:A.N/2
DG9:C.O4'/1 3.15 ASN106:A.ND2/2
DG10:C.OP1/1 2.7 SER373:A.OG/2
DG10:C.OP2/1 3.01 HIS374:A.N/2
DG10:C.O4'/1 2.96 LYS107:A.NZ/2
DG10:C.N7/1 2.61 ARG69:A.NH2/2
DG10:C.O6/1 3.05 ARG69:A.NH2/2
DG17:C.OP1/1 2.77 ARG41:A.NH2/2
DG17:C.OP2/1 2.92 TYR28:A.OH/2
DC18:C.OP1/1 3.12 LYS26:A.N/2
DC18:C.OP2/1 3.37 GLN27:A.N/2
DT8:D.OP2/1 2.78 ARG86:A.NH1/2
DT8:D.OP2/1 2.89 ARG86:A.NH2/2
DT9:D.O4/1 3.18 ARG69:A.NH1/2
DC11:D.O2/1 2.69 ARG313:A.NH1/2
DA17:D.OP2/1 2.71 LYS228:A.NZ/1
DT2:C.O2/2 2.7 ASN348:A.ND2/2
DT3:C.OP1/2 2.79 THR210:A.N/2
DT3:C.OP1/2 2.87 THR210:A.OG1/2
DT3:C.OP1/2 2.69 SER216:A.OG/2
DT3:C.O4'/2 3.32 ASN348:A.ND2/2
DG4:C.OP1/2 2.79 LEU113:A.N/2
DG4:C.OP1/2 2.72 ARG350:A.NE/2
DG4:C.OP2/2 3.12 ARG350:A.NH2/2
DG4:C.N2/2 3.29 GLY218:A.O/2
DT5:C.OP2/2 2.73 ARG114:A.NE/2
DT5:C.OP2/2 3.18 ARG114:A.NH2/2
DT5:C.O5'/2 3.4 ARG114:A.NH2/2
DC6:C.O2/2 2.89 ARG222:A.NE/2
DC6:C.O2/2 2.93 ARG222:A.NH2/2
DA7:C.OP2/2 2.69 SER258:A.OG/2
DA7:C.O4'/2 2.8 ARG222:A.NH2/2
DA7:C.O3'/2 2.88 ARG229:A.NH2/2
DT8:C.OP1/2 2.81 ARG229:A.NH1/2
DT8:C.OP2/2 3 GLY68:A.N/1
DT8:C.O2/2 2.84 ASN106:A.ND2/1
DG9:C.OP1/2 3.01 HIS374:A.NE2/1
DG9:C.OP2/2 3.1 ARG69:A.N/1
DG9:C.O4'/2 3.15 ASN106:A.ND2/1
DG10:C.OP1/2 2.7 SER373:A.OG/1
DG10:C.OP2/2 3.01 HIS374:A.N/1
DG10:C.O4'/2 2.96 LYS107:A.NZ/1
DG10:C.N7/2 2.61 ARG69:A.NH2/1
DG10:C.O6/2 3.05 ARG69:A.NH2/1
DG17:C.OP1/2 2.77 ARG41:A.NH2/1
DG17:C.OP2/2 2.92 TYR28:A.OH/1
DC18:C.OP1/2 3.12 LYS26:A.N/1
DC18:C.OP2/2 3.37 GLN27:A.N/1
DT8:D.OP2/2 2.78 ARG86:A.NH1/1
DT8:D.OP2/2 2.89 ARG86:A.NH2/1
DT9:D.O4/2 3.18 ARG69:A.NH1/1
DC11:D.O2/2 2.69 ARG313:A.NH1/1
DA17:D.OP2/2 2.71 LYS228:A.NZ/2
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Nucleic atom d_n2w water d_p2w Protein atom
DT2:C.OP1/1 2.68 201:C/1 2.79 LEU206:A.O/1
DT3:C.OP2/1 3.02 551:A/1 2.86 SER216:A.O/1
DG4:C.OP2/1 2.72 509:A/1 2.84 ARG350:A.O/1
DG4:C.OP2/1 2.72 509:A/1 2.66 SER365:A.OG/1
DT5:C.OP1/1 2.74 207:C/1 2.89 PRO115:A.O/1
DC6:C.OP1/1 2.96 215:C/1 3.35 ARG117:A.NH2/1
DA7:C.OP2/1 2.7 203:C/1 2.99 VAL260:A.N/1
DT8:C.OP1/1 2.71 205:C/1 2.8 HIS66:A.O/2
DT8:C.OP1/1 2.71 205:C/1 2.75 ASN103:A.ND2/2
DT8:C.O3'/1 3.03 204:C/1 2.93 ASN103:A.ND2/2
DG9:C.OP1/1 2.71 204:C/1 2.93 ASN103:A.ND2/2
DG9:C.N7/1 2.88 211:C/1 3.26 GLU70:A.N/2
DG9:C.N2/1 2.84 210:C/1 2.86 LYS107:A.NZ/2
DG9:C.N2/1 2.84 210:C/1 3.24 ARG313:A.NH1/2
DA7:D.OP2/1 3.09 109:D/1 3.16 ARG86:A.N/2
DA7:D.OP2/1 3.09 109:D/1 3.1 ARG86:A.NH1/2
DA12:D.N3/1 2.76 501:A/2 2.61 ASN106:A.O/2
DA12:D.N3/1 2.76 501:A/2 3.07 ARG313:A.NH1/2
DT13:D.O2/1 2.71 102:D/1 2.86 SER105:A.O/2
DC16:D.OP1/1 3.03 540:A/2 2.78 ARG336:A.NE/2
DC16:D.OP1/1 3.03 540:A/2 3.09 ARG336:A.NH2/2
DA17:D.OP1/1 2.69 101:D/1 2.79 ASP128:A.OD2/1
DA17:D.OP1/1 2.69 101:D/1 2.83 TYR129:A.O/1
DA17:D.OP1/1 2.9 555:A/1 2.89 GLY131:A.N/1
DA17:D.OP1/1 2.9 555:A/1 3.12 GLY131:A.O/1
DT2:C.OP1/2 2.68 201:C/2 2.79 LEU206:A.O/2
DT3:C.OP2/2 3.02 551:A/2 2.86 SER216:A.O/2
DG4:C.OP2/2 2.72 509:A/2 2.84 ARG350:A.O/2
DG4:C.OP2/2 2.72 509:A/2 2.66 SER365:A.OG/2
DT5:C.OP1/2 2.74 207:C/2 2.89 PRO115:A.O/2
DC6:C.OP1/2 2.96 215:C/2 3.35 ARG117:A.NH2/2
DA7:C.OP2/2 2.7 203:C/2 2.99 VAL260:A.N/2
DT8:C.OP1/2 2.71 205:C/2 2.8 HIS66:A.O/1
DT8:C.OP1/2 2.71 205:C/2 2.75 ASN103:A.ND2/1
DT8:C.O3'/2 3.03 204:C/2 2.93 ASN103:A.ND2/1
DG9:C.OP1/2 2.71 204:C/2 2.93 ASN103:A.ND2/1
DG9:C.N7/2 2.88 211:C/2 3.26 GLU70:A.N/1
DG9:C.N2/2 2.84 210:C/2 2.86 LYS107:A.NZ/1
DG9:C.N2/2 2.84 210:C/2 3.24 ARG313:A.NH1/1
DA7:D.OP2/2 3.09 109:D/2 3.16 ARG86:A.N/1
DA7:D.OP2/2 3.09 109:D/2 3.1 ARG86:A.NH1/1
DA12:D.N3/2 2.76 501:A/1 2.61 ASN106:A.O/1
DA12:D.N3/2 2.76 501:A/1 3.07 ARG313:A.NH1/1
DT13:D.O2/2 2.71 102:D/2 2.86 SER105:A.O/1
DC16:D.OP1/2 3.03 540:A/1 2.78 ARG336:A.NE/1
DC16:D.OP1/2 3.03 540:A/1 3.09 ARG336:A.NH2/1
DA17:D.OP1/2 2.69 101:D/2 2.79 ASP128:A.OD2/2
DA17:D.OP1/2 2.69 101:D/2 2.83 TYR129:A.O/2
DA17:D.OP1/2 2.9 555:A/2 2.89 GLY131:A.N/2
DA17:D.OP1/2 2.9 555:A/2 3.12 GLY131:A.O/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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