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Nucleic atom dist Protein atom
DT2:C.O2/1 2.75 ASN348:A.ND2/1
DT3:C.OP1/1 2.8 THR210:A.N/1
DT3:C.OP1/1 2.84 THR210:A.OG1/1
DT3:C.OP1/1 2.67 SER216:A.OG/1
DT3:C.O4'/1 3.37 ASN348:A.ND2/1
DG4:C.OP1/1 2.77 LEU113:A.N/1
DG4:C.OP1/1 2.77 ARG350:A.NE/1
DG4:C.OP2/1 3.13 ARG350:A.NH2/1
DG4:C.N2/1 3.29 GLY218:A.O/1
DT5:C.OP2/1 2.77 ARG114:A.NE/1
DT5:C.OP2/1 3.07 ARG114:A.NH2/1
DT5:C.O5'/1 3.25 ARG114:A.NH2/1
DC6:C.O2/1 2.8 ARG222:A.NE/1
DC6:C.O2/1 2.89 ARG222:A.NH2/1
DA7:C.OP2/1 2.67 SER258:A.OG/1
DA7:C.O4'/1 2.79 ARG222:A.NH2/1
DA7:C.O3'/1 3.06 ARG229:A.NH2/1
DT8:C.OP1/1 2.78 ARG229:A.NH1/1
DT8:C.OP2/1 2.9 GLY68:A.N/2
DT8:C.O2/1 2.91 ASN106:A.ND2/2
DG9:C.OP1/1 2.92 HIS374:A.NE2/2
DG9:C.OP2/1 3.07 ARG69:A.N/2
DG9:C.O4'/1 3.01 ASN106:A.ND2/2
DG10:C.OP1/1 2.89 SER373:A.OG/2
DG10:C.OP2/1 2.97 HIS374:A.N/2
DG10:C.O4'/1 3.03 LYS107:A.NZ/2
DG10:C.N7/1 2.57 ARG69:A.NH2/2
DG10:C.O6/1 3.05 ARG69:A.NH2/2
DG17:C.OP1/1 3.02 ARG41:A.NH2/2
DG17:C.OP2/1 3.23 TYR28:A.OH/2
DC18:C.OP1/1 3.16 LYS26:A.N/2
DA6:D.O5'/1 3.02 ASN84:A.OD1/2
DT8:D.OP2/1 2.77 ARG86:A.NH1/2
DT8:D.OP2/1 3.06 ARG86:A.NH2/2
DT9:D.OP1/1 3.26 LYS262:A.NZ/1
DT9:D.OP2/1 2.92 LYS262:A.NZ/1
DT9:D.O4/1 3.12 ARG69:A.NH1/2
DC11:D.O2/1 2.73 ARG313:A.NH1/2
DT13:D.OP1/1 2.7 SER311:A.OG/2
DT13:D.OP1/1 3.27 ARG313:A.N/2
DA17:D.OP2/1 2.63 LYS228:A.NZ/1
DT2:C.O2/2 2.75 ASN348:A.ND2/2
DT3:C.OP1/2 2.8 THR210:A.N/2
DT3:C.OP1/2 2.84 THR210:A.OG1/2
DT3:C.OP1/2 2.67 SER216:A.OG/2
DT3:C.O4'/2 3.37 ASN348:A.ND2/2
DG4:C.OP1/2 2.77 LEU113:A.N/2
DG4:C.OP1/2 2.77 ARG350:A.NE/2
DG4:C.OP2/2 3.13 ARG350:A.NH2/2
DG4:C.N2/2 3.29 GLY218:A.O/2
DT5:C.OP2/2 2.77 ARG114:A.NE/2
DT5:C.OP2/2 3.07 ARG114:A.NH2/2
DT5:C.O5'/2 3.25 ARG114:A.NH2/2
DC6:C.O2/2 2.8 ARG222:A.NE/2
DC6:C.O2/2 2.89 ARG222:A.NH2/2
DA7:C.OP2/2 2.67 SER258:A.OG/2
DA7:C.O4'/2 2.79 ARG222:A.NH2/2
DA7:C.O3'/2 3.06 ARG229:A.NH2/2
DT8:C.OP1/2 2.78 ARG229:A.NH1/2
DT8:C.OP2/2 2.9 GLY68:A.N/1
DT8:C.O2/2 2.91 ASN106:A.ND2/1
DG9:C.OP1/2 2.92 HIS374:A.NE2/1
DG9:C.OP2/2 3.07 ARG69:A.N/1
DG9:C.O4'/2 3.01 ASN106:A.ND2/1
DG10:C.OP1/2 2.89 SER373:A.OG/1
DG10:C.OP2/2 2.97 HIS374:A.N/1
DG10:C.O4'/2 3.03 LYS107:A.NZ/1
DG10:C.N7/2 2.57 ARG69:A.NH2/1
DG10:C.O6/2 3.05 ARG69:A.NH2/1
DG17:C.OP1/2 3.02 ARG41:A.NH2/1
DG17:C.OP2/2 3.23 TYR28:A.OH/1
DC18:C.OP1/2 3.16 LYS26:A.N/1
DA6:D.O5'/2 3.02 ASN84:A.OD1/1
DT8:D.OP2/2 2.77 ARG86:A.NH1/1
DT8:D.OP2/2 3.06 ARG86:A.NH2/1
DT9:D.OP1/2 3.26 LYS262:A.NZ/2
DT9:D.OP2/2 2.92 LYS262:A.NZ/2
DT9:D.O4/2 3.12 ARG69:A.NH1/1
DC11:D.O2/2 2.73 ARG313:A.NH1/1
DT13:D.OP1/2 2.7 SER311:A.OG/1
DT13:D.OP1/2 3.27 ARG313:A.N/1
DA17:D.OP2/2 2.63 LYS228:A.NZ/2
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Nucleic atom d_n2w water d_p2w Protein atom
DT3:C.OP2/1 2.97 563:A/1 2.89 SER216:A.O/1
DG4:C.OP2/1 2.74 506:A/1 2.75 ARG350:A.O/1
DG4:C.OP2/1 2.74 506:A/1 2.65 SER365:A.OG/1
DT5:C.OP1/1 2.73 206:C/1 2.83 PRO115:A.O/1
DC6:C.OP1/1 2.87 209:C/1 3.29 ARG117:A.NH2/1
DA7:C.OP2/1 2.7 204:C/1 2.98 VAL260:A.N/1
DT8:C.OP1/1 2.68 203:C/1 2.83 HIS66:A.O/2
DT8:C.OP1/1 2.68 203:C/1 2.81 ASN103:A.ND2/2
DT8:C.O3'/1 2.8 202:C/1 2.79 ASN103:A.ND2/2
DG9:C.OP1/1 2.68 202:C/1 2.79 ASN103:A.ND2/2
DG9:C.N7/1 2.97 213:C/1 3.2 GLU70:A.N/2
DG9:C.N2/1 3.05 549:A/2 2.79 LYS107:A.NZ/2
DG9:C.N2/1 3.05 549:A/2 3.33 ARG313:A.NH1/2
DA7:D.OP2/1 3.12 571:A/2 3 ARG86:A.N/2
DA7:D.OP2/1 3.12 571:A/2 3.22 ARG86:A.NH1/2
DA12:D.N3/1 2.75 502:A/2 2.63 ASN106:A.O/2
DA12:D.N3/1 2.75 502:A/2 3.07 ARG313:A.NH1/2
DT13:D.O2/1 2.7 518:A/2 2.69 SER105:A.O/2
DG14:D.OP1/1 2.94 105:D/1 3.16 SER109:A.N/2
DG14:D.OP1/1 2.94 105:D/1 3.16 SER109:A.OG/2
DC16:D.OP1/1 3.03 552:A/2 2.81 ARG336:A.NE/2
DC16:D.OP1/1 3.03 552:A/2 3.14 ARG336:A.NH2/2
DA17:D.OP1/1 2.74 102:D/1 2.86 ASP128:A.OD2/1
DA17:D.OP1/1 2.74 102:D/1 2.91 TYR129:A.O/1
DA17:D.OP1/1 2.93 553:A/1 2.82 GLY131:A.N/1
DA17:D.OP1/1 2.93 553:A/1 3.17 GLY131:A.O/1
DA17:D.OP1/1 2.74 102:D/1 3.3 ASN224:A.ND2/1
DT3:C.OP2/2 2.97 563:A/2 2.89 SER216:A.O/2
DG4:C.OP2/2 2.74 506:A/2 2.75 ARG350:A.O/2
DG4:C.OP2/2 2.74 506:A/2 2.65 SER365:A.OG/2
DT5:C.OP1/2 2.73 206:C/2 2.83 PRO115:A.O/2
DC6:C.OP1/2 2.87 209:C/2 3.29 ARG117:A.NH2/2
DA7:C.OP2/2 2.7 204:C/2 2.98 VAL260:A.N/2
DT8:C.OP1/2 2.68 203:C/2 2.83 HIS66:A.O/1
DT8:C.OP1/2 2.68 203:C/2 2.81 ASN103:A.ND2/1
DT8:C.O3'/2 2.8 202:C/2 2.79 ASN103:A.ND2/1
DG9:C.OP1/2 2.68 202:C/2 2.79 ASN103:A.ND2/1
DG9:C.N7/2 2.97 213:C/2 3.2 GLU70:A.N/1
DG9:C.N2/2 3.05 549:A/1 2.79 LYS107:A.NZ/1
DG9:C.N2/2 3.05 549:A/1 3.33 ARG313:A.NH1/1
DA7:D.OP2/2 3.12 571:A/1 3 ARG86:A.N/1
DA7:D.OP2/2 3.12 571:A/1 3.22 ARG86:A.NH1/1
DA12:D.N3/2 2.75 502:A/1 2.63 ASN106:A.O/1
DA12:D.N3/2 2.75 502:A/1 3.07 ARG313:A.NH1/1
DT13:D.O2/2 2.7 518:A/1 2.69 SER105:A.O/1
DG14:D.OP1/2 2.94 105:D/2 3.16 SER109:A.N/1
DG14:D.OP1/2 2.94 105:D/2 3.16 SER109:A.OG/1
DC16:D.OP1/2 3.03 552:A/1 2.81 ARG336:A.NE/1
DC16:D.OP1/2 3.03 552:A/1 3.14 ARG336:A.NH2/1
DA17:D.OP1/2 2.74 102:D/2 2.86 ASP128:A.OD2/2
DA17:D.OP1/2 2.74 102:D/2 2.91 TYR129:A.O/2
DA17:D.OP1/2 2.93 553:A/2 2.82 GLY131:A.N/2
DA17:D.OP1/2 2.93 553:A/2 3.17 GLY131:A.O/2
DA17:D.OP1/2 2.74 102:D/2 3.3 ASN224:A.ND2/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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