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Nucleic atom dist Protein atom
DA-55:I.OP1/1 3.11 SER56:D.N/1
DA-55:I.OP1/1 3.15 SER56:D.OG/1
DA-55:I.OP2/1 3.03 SER56:D.OG/1
DA-46:I.O3'/1 2.95 ARG33:D.NH2/1
DA-44:I.OP2/1 2.79 ARG32:C.NE/1
DG-43:I.OP1/1 2.74 ARG17:C.N/1
DG-43:I.OP2/1 2.96 ARG17:C.NE/1
DT-42:I.OP1/1 3.01 LYS15:C.N/1
DG-34:I.OP1/1 3.1 THR88:D.N/1
DG-34:I.OP2/1 3.24 SER87:D.N/1
DA-33:I.OP2/1 3.28 ARG86:D.NH2/1
DC-24:I.OP2/1 3.1 SER86:A.N/1
DA-23:I.OP1/1 2.76 ARG72:A.NH1/1
DA-23:I.OP1/1 3.13 PHE84:A.N/1
DA-23:I.OP2/1 2.85 ARG72:A.NH2/1
DA-13:I.OP1/1 2.78 ARG36:B.NH2/1
DA-13:I.OP2/1 3.1 ARG36:B.NH1/1
DC-5:I.OP1/1 2.88 ARG42:A.NE/1
DC-5:I.OP2/1 2.98 ARG42:A.NH2/1
DG-3:I.OP1/1 2.73 VAL117:A.N/1
DG-3:I.OP1/1 2.92 THR118:A.N/1
DG-3:I.OP1/1 2.97 THR118:A.OG1/1
DT7:I.OP2/1 3.16 GLY48:F.N/1
DG8:I.OP1/1 2.69 ILE46:F.N/1
DA9:I.OP1/1 2.89 GLY44:E.N/1
DA9:I.OP1/1 2.92 VAL46:E.N/1
DA9:I.OP1/1 3.05 ALA47:E.N/1
DA9:I.N3/1 2.8 ARG40:E.NH2/1
DA10:I.OP1/1 2.99 TYR41:E.N/1
DT17:I.OP2/1 3.07 ARG69:E.NH1/1
DT17:I.O3'/1 2.95 ARG63:E.NH2/1
DT18:I.OP1/1 3.24 ARG63:E.NE/1
DT18:I.OP1/1 2.88 LYS64:E.N/1
DT18:I.OP2/1 2.82 LEU65:E.N/1
DC28:I.OP1/1 2.9 LYS79:F.N/1
DC28:I.OP1/1 2.77 THR80:F.OG1/1
DG30:I.OP1/1 3.22 SER32:D.N/1
DG30:I.OP1/1 2.49 SER32:D.OG/1
DG30:I.N2/1 3.16 ARG29:D.NH2/1
DA38:I.OP1/1 2.79 ALA45:G.N/1
DT39:I.OP1/1 3.13 VAL43:G.N/1
DG49:I.OP1/1 2.92 ARG29:G.NH2/1
DG49:I.OP1/1 3.18 SER36:H.N/1
DT50:I.OP1/1 3.1 LYS34:H.N/1
DT50:I.O3'/1 2.84 ARG31:H.NH1/1
DA51:I.OP1/1 2.74 ARG31:H.NH1/1
DC59:I.OP1/1 3.11 THR76:G.N/1
DC59:I.OP1/1 2.99 ARG77:G.N/1
DG71:I.OP1/1 2.9 ARG42:A.N/1
DG71:I.OP1/1 2.55 THR45:A.OG1/1
DT73:I.OP1/1 2.73 LYS37:A.NZ/1
DA-55:J.OP1/1 2.76 SER56:H.N/1
DA-44:J.OP1/1 3.29 ARG32:G.NH2/1
DA-44:J.OP2/1 2.67 ARG32:G.NE/1
DG-43:J.OP1/1 2.88 ARG17:G.N/1
DG-43:J.OP2/1 2.9 ARG17:G.NE/1
DG-43:J.OP2/1 2.98 ARG17:G.NH2/1
DT-42:J.OP1/1 3.17 LYS15:G.N/1
DG-34:J.OP1/1 3.27 SER87:H.N/1
DG-34:J.OP1/1 3.06 THR88:H.N/1
DG-34:J.OP2/1 3.21 SER87:H.N/1
DT-29:J.O2/1 2.65 ARG29:D.NH1/1
DC-27:J.OP1/1 3.15 ARG29:D.N/1
DC-24:J.OP2/1 3.17 SER86:E.N/1
DA-23:J.OP1/1 2.74 ARG72:E.NH1/1
DA-23:J.OP1/1 3 PHE84:E.N/1
DA-23:J.OP2/1 2.79 ARG72:E.NH2/1
DA-13:J.OP1/1 2.81 ARG36:F.NH2/1
DA-13:J.OP2/1 3.09 ARG36:F.NH1/1
DG-3:J.OP1/1 2.73 VAL117:E.N/1
DG-3:J.OP1/1 2.94 THR118:E.N/1
DG-3:J.OP1/1 2.99 THR118:E.OG1/1
DT7:J.OP2/1 3.29 GLY48:B.N/1
DG8:J.OP1/1 2.69 ILE46:B.N/1
DG8:J.O3'/1 3.24 GLY44:A.N/1
DA9:J.OP1/1 2.94 GLY44:A.N/1
DA9:J.OP1/1 2.85 VAL46:A.N/1
DA9:J.OP1/1 3.02 ALA47:A.N/1
DA9:J.N3/1 2.46 ARG40:A.NH2/1
DA10:J.OP1/1 2.89 TYR41:A.N/1
DT17:J.OP1/1 2.87 ARG69:A.NH2/1
DT17:J.OP2/1 2.84 ARG69:A.NH1/1
DT18:J.OP1/1 3.08 LYS64:A.N/1
DT18:J.OP2/1 2.93 LEU65:A.N/1
DC28:J.OP1/1 2.92 LYS79:B.N/1
DC28:J.OP1/1 2.63 THR80:B.OG1/1
DG30:J.OP1/1 2.79 SER32:H.OG/1
DA38:J.OP1/1 2.83 ALA45:C.N/1
DT39:J.OP1/1 3.12 VAL43:C.N/1
DG49:J.OP1/1 3.02 ARG29:C.NH2/1
DG49:J.OP1/1 3.02 SER36:D.N/1
DG49:J.OP1/1 3.21 SER36:D.O/1
DT50:J.OP1/1 2.87 LYS34:D.N/1
DC59:J.OP1/1 3.22 THR76:C.N/1
DC59:J.OP1/1 3.02 ARG77:C.N/1
DG71:J.OP1/1 2.77 ARG42:E.N/1
DG71:J.OP1/1 2.51 THR45:E.OG1/1
DA72:J.OP2/1 2.55 ARG42:E.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA-55:I.OP1/1 2.99 215:D/1 2.81 SER56:D.OG/1
DA-55:I.OP1/1 2.99 215:D/1 2.73 LYS57:D.N/1
DG-43:I.OP1/1 3.08 237:C/1 3.03 GLY28:C.N/1
DC-24:I.OP2/1 2.9 220:A/1 3.19 SER86:A.N/1
DC-24:I.OP2/1 2.9 220:A/1 2.76 SER86:A.OG/1
DC-24:I.OP2/1 2.9 220:A/1 3.05 SER87:A.N/1
DG8:I.OP2/1 2.64 216:I/1 2.75 ILE46:F.O/1
DG8:I.OP2/1 2.64 216:I/1 2.76 TYR51:F.OH/1
DA10:I.OP1/1 2.72 219:I/1 2.9 HIS39:E.ND1/1
DA29:I.OP1/1 2.89 342:E/1 2.85 GLN85:E.NE2/1
DG49:I.OP2/1 2.86 206:H/1 2.58 SER36:H.O/1
DG49:I.OP2/1 2.86 206:H/1 3.21 ILE39:H.N/1
DC59:I.OP1/1 2.78 214:G/1 2.71 ARG77:G.O/1
DC-24:J.OP2/1 3.04 345:E/1 2.88 SER86:E.OG/1
DC-24:J.OP2/1 3.04 345:E/1 3.07 SER87:E.N/1
DA-23:J.OP2/1 2.75 221:J/1 3.48 ARG72:E.NH2/1
DA-23:J.OP2/1 2.73 307:E/1 2.48 PHE84:E.O/1
DA-13:J.OP1/1 2.95 201:F/1 2.47 THR30:F.OG1/1
DT-12:J.OP2/1 2.68 219:J/1 2.94 LYS31:F.N/1
DC-5:J.OP1/1 2.52 209:J/1 2.98 PRO43:E.O/1
DT-4:J.OP1/1 2.59 211:J/1 2.86 PRO43:E.O/1
DG8:J.OP2/1 2.89 202:B/1 2.57 ILE46:B.O/1
DG8:J.OP2/1 2.89 202:B/1 2.86 TYR51:B.OH/1
DG49:J.OP2/1 2.76 222:J/1 2.78 SER36:D.O/1
DG49:J.OP2/1 2.76 222:J/1 2.99 SER38:D.N/1
DG49:J.OP2/1 2.76 222:J/1 3.02 ILE39:D.N/1
DC59:J.OP1/1 2.86 201:C/1 2.45 ARG77:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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