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Nucleic atom dist Protein atom
DA-55:I.OP1/1 3.06 SER56:D.N/1
DA-44:I.OP2/1 2.78 ARG32:C.NH1/1
DG-43:I.OP1/1 2.65 ARG17:C.N/1
DG-43:I.OP2/1 3.09 ARG17:C.NE/1
DT-42:I.OP1/1 3.13 LYS15:C.N/1
DT-42:I.OP1/1 3.2 ARG20:C.NH2/1
DG-34:I.OP1/1 3.27 SER87:D.N/1
DG-34:I.OP1/1 3.04 THR88:D.N/1
DG-34:I.OP1/1 2.64 THR88:D.OG1/1
DG-34:I.OP2/1 3.21 SER87:D.N/1
DA-33:I.OP2/1 3.24 LYS77:B.NZ/1
DA-33:I.OP2/1 3.04 ARG86:D.NH2/1
DC-24:I.OP2/1 3.23 SER86:A.N/1
DA-23:I.OP1/1 3.03 ARG72:A.NH1/1
DA-23:I.OP1/1 2.89 PHE84:A.N/1
DA-23:I.OP2/1 3 ARG72:A.NH2/1
DA-13:I.OP1/1 2.94 ARG36:B.NH2/1
DA-13:I.OP2/1 3.24 ARG36:B.NH1/1
DG-3:I.OP1/1 2.77 VAL117:A.N/1
DG-3:I.OP1/1 3.02 THR118:A.OG1/1
DT7:I.OP2/1 3.19 GLY48:F.N/1
DG8:I.OP1/1 2.71 ILE46:F.N/1
DG8:I.O3'/1 3.3 GLY44:E.N/1
DA9:I.OP1/1 2.82 GLY44:E.N/1
DA9:I.OP1/1 2.92 VAL46:E.N/1
DA9:I.OP1/1 3.15 ALA47:E.N/1
DA9:I.N3/1 2.86 ARG40:E.NH2/1
DA10:I.OP1/1 2.87 TYR41:E.N/1
DT17:I.OP2/1 2.29 ARG69:E.NH2/1
DT17:I.O3'/1 3.22 ARG63:E.NH2/1
DT18:I.OP1/1 3.42 ARG63:E.NE/1
DT18:I.OP1/1 2.89 LYS64:E.N/1
DT18:I.OP2/1 2.92 LEU65:E.N/1
DG27:I.OP1/1 2.65 LYS79:F.NZ/1
DC28:I.OP1/1 2.92 LYS79:F.N/1
DC28:I.OP1/1 2.64 THR80:F.OG1/1
DG30:I.OP1/1 3.42 SER32:D.N/1
DG30:I.OP1/1 2.45 SER32:D.OG/1
DG30:I.N3/1 3.03 ARG29:D.NH1/1
DA38:I.OP1/1 2.92 ALA45:G.N/1
DT39:I.OP1/1 3.02 VAL43:G.N/1
DG49:I.OP1/1 2.94 ARG29:G.NH2/1
DG49:I.OP1/1 3.24 SER36:H.N/1
DT50:I.OP1/1 3.24 LYS34:H.N/1
DA51:I.O5'/1 2.49 ARG31:H.NH1/1
DC59:I.OP1/1 3.29 THR76:G.N/1
DC59:I.OP1/1 3.07 ARG77:G.N/1
DC59:I.OP2/1 3.24 THR76:G.N/1
DG71:I.OP1/1 2.82 ARG42:A.N/1
DG71:I.OP1/1 2.71 THR45:A.OG1/1
DT73:I.OP1/1 2.64 LYS37:A.NZ/1
DA-55:J.OP1/1 2.79 SER56:H.N/1
DA-44:J.OP2/1 2.96 ARG32:G.NE/1
DG-43:J.OP1/1 2.86 ARG17:G.N/1
DG-43:J.OP2/1 2.81 ARG17:G.NE/1
DT-42:J.OP1/1 3.21 LYS15:G.N/1
DG-34:J.OP1/1 3.28 SER87:H.N/1
DG-34:J.OP1/1 2.98 THR88:H.N/1
DG-34:J.OP1/1 2.9 THR88:H.OG1/1
DG-34:J.OP2/1 3.3 SER87:H.N/1
DA-33:J.OP2/1 2.49 ARG86:H.NH2/1
DT-29:J.O2/1 3.36 ARG29:D.NH2/1
DG-28:J.O4'/1 2.84 ARG29:D.NH2/1
DC-27:J.OP1/1 3.04 ARG29:D.N/1
DC-24:J.OP2/1 3.3 SER86:E.N/1
DA-23:J.OP1/1 2.88 ARG72:E.NH1/1
DA-23:J.OP1/1 2.98 PHE84:E.N/1
DA-23:J.OP2/1 2.93 ARG72:E.NH2/1
DC-14:J.O3'/1 2.95 ARG63:E.NH1/1
DA-13:J.OP1/1 3.01 ARG36:F.NH2/1
DA-13:J.OP2/1 3.15 ARG36:F.NH1/1
DG-3:J.OP1/1 2.65 VAL117:E.N/1
DG-3:J.OP1/1 3 THR118:E.OG1/1
DG8:J.OP1/1 2.71 ILE46:B.N/1
DG8:J.O3'/1 3.27 GLY44:A.N/1
DA9:J.OP1/1 3.03 GLY44:A.N/1
DA9:J.OP1/1 2.9 VAL46:A.N/1
DA9:J.OP1/1 3.06 ALA47:A.N/1
DA9:J.N3/1 2.51 ARG40:A.NH2/1
DA10:J.OP1/1 2.96 TYR41:A.N/1
DA10:J.O4'/1 3.16 ARG40:A.NH1/1
DT17:J.OP2/1 2.59 ARG69:A.NH2/1
DT17:J.O3'/1 2.94 ARG63:A.NH2/1
DT18:J.OP1/1 3.13 LYS64:A.N/1
DT18:J.OP2/1 2.91 LEU65:A.N/1
DC28:J.OP1/1 2.91 LYS79:B.N/1
DC28:J.OP1/1 2.55 THR80:B.OG1/1
DG30:J.OP1/1 2.25 SER32:H.OG/1
DA38:J.OP1/1 3.08 ALA45:C.N/1
DT39:J.OP1/1 3.29 VAL43:C.N/1
DG49:J.OP1/1 3.07 ARG29:C.NH2/1
DG49:J.OP1/1 3.04 SER36:D.N/1
DG49:J.OP1/1 3.23 SER36:D.O/1
DT50:J.OP2/1 2.95 LYS34:D.O/1
DC59:J.OP1/1 3.22 THR76:C.N/1
DC59:J.OP1/1 2.94 ARG77:C.N/1
DC59:J.OP2/1 3.38 THR76:C.N/1
DG71:J.OP1/1 2.85 ARG42:E.N/1
DG71:J.OP1/1 2.51 THR45:E.OG1/1
DA72:J.OP2/1 2.67 ARG42:E.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT-68:I.OP1/1 2.69 307:E/1 2.67 HIS39:E.N/1
DA-55:I.OP1/1 3.01 201:D/1 2.64 SER56:D.OG/1
DA-55:I.OP1/1 3.01 201:D/1 2.49 LYS57:D.N/1
DC-24:I.OP2/1 2.95 208:A/1 2.6 SER86:A.OG/1
DC-24:I.OP2/1 2.95 208:A/1 2.92 SER87:A.N/1
DC-24:J.OP2/1 2.96 319:E/1 2.77 SER86:E.OG/1
DC-24:J.OP2/1 2.96 319:E/1 3.03 SER87:E.N/1
DA-23:J.OP2/1 2.66 301:E/1 2.57 PHE84:E.O/1
DA-13:J.OP1/1 3.25 201:F/1 2.25 THR30:F.OG1/1
DT-12:J.OP2/1 2.58 206:J/1 2.92 LYS31:F.N/1
DG48:J.OP1/1 2.26 201:J/1 2.43 TYR40:D.OH/1
DC59:J.OP1/1 2.56 203:C/1 2.5 ARG77:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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