Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC9:I.OP1/1 3.17 LYS56:E.NZ/1
DA11:I.OP2/1 2.87 LYS74:C.NZ/1
DA19:I.OP1/1 3.07 SER56:D.N/1
DA19:I.OP2/1 2.78 SER56:D.OG/1
DT20:I.OP1/1 3.23 ILE54:D.N/1
DA29:I.OP1/1 2.75 ARG32:C.NE/1
DA29:I.OP1/1 2.62 ARG32:C.NH2/1
DA29:I.OP2/1 2.88 ARG32:C.NE/1
DA30:I.OP1/1 2.72 ARG17:C.N/1
DA30:I.OP2/1 2.79 ARG17:C.NE/1
DG31:I.OP1/1 3 LYS15:C.N/1
DG31:I.O3'/1 3.1 ARG11:C.NH1/1
DT32:I.OP1/1 3.07 ALA12:C.N/1
DG39:I.OP1/1 2.99 SER87:D.N/1
DG39:I.OP1/1 3.2 SER87:D.OG/1
DC50:I.OP1/1 3.1 ARG72:A.NH1/1
DC50:I.OP1/1 3.23 ARG72:A.NH2/1
DC50:I.OP1/1 3.09 PHE84:A.N/1
DC50:I.OP2/1 3.13 ARG72:A.NH2/1
DG59:I.O3'/1 3.06 ARG63:A.NE/1
DC60:I.OP1/1 3.19 ARG63:A.NE/1
DC60:I.OP2/1 3.13 ARG36:B.NH1/1
DG68:I.OP2/1 2.75 ARG42:A.NH2/1
DC69:I.O3'/1 3.11 ARG45:B.NH2/1
DT70:I.OP1/1 2.66 VAL117:A.N/1
DG81:I.OP1/1 2.63 ILE46:F.N/1
DG81:I.OP1/1 2.82 ILE46:F.O/1
DG81:I.O3'/1 3.41 GLY44:E.N/1
DA82:I.OP1/1 3.05 GLY44:E.N/1
DA82:I.OP1/1 3.25 VAL46:E.N/1
DA83:I.OP1/1 3.21 TYR41:E.N/1
DT90:I.OP2/1 3.28 ARG69:E.NH1/1
DT90:I.OP2/1 2.93 ARG69:E.NH2/1
DT91:I.OP1/1 2.87 LYS64:E.N/1
DT91:I.OP2/1 2.85 LEU65:E.N/1
DA99:I.O3'/1 3.06 ARG83:E.NH1/1
DG100:I.OP1/1 2.14 LYS79:F.NZ/1
DC101:I.OP1/1 3.11 LYS79:F.N/1
DC101:I.OP1/1 2.62 THR80:F.N/1
DC101:I.OP1/1 2.89 THR80:F.OG1/1
DC101:I.OP2/1 2.93 LYS79:F.N/1
DA111:I.OP1/1 3.01 ALA45:G.N/1
DA111:I.O4'/1 3.2 ARG42:G.NH1/1
DT112:I.OP1/1 3.18 VAL43:G.N/1
DG121:I.OP1/1 3.25 ARG29:G.NH1/1
DG121:I.OP1/1 3.39 ARG29:G.NH2/1
DG121:I.OP1/1 3.2 SER36:H.N/1
DT122:I.OP1/1 3.44 ARG33:H.N/1
DT122:I.OP1/1 2.96 LYS34:H.N/1
DT122:I.OP1/1 3.1 LYS34:H.O/1
DG130:I.OP1/1 2.76 THR76:G.N/1
DG130:I.OP1/1 2.55 ARG77:G.N/1
DT142:I.OP1/1 3.15 ARG42:A.N/1
DT142:I.OP1/1 2.51 THR45:A.OG1/1
DT165:J.OP1/1 3.17 SER56:H.N/1
DG176:J.OP1/1 2.91 ARG17:G.N/1
DG176:J.OP2/1 3.15 ARG17:G.NE/1
DG176:J.OP2/1 2.97 ARG17:G.NH2/1
DT177:J.OP1/1 2.53 LYS15:G.N/1
DT177:J.OP1/1 3 LYS15:G.O/1
DT177:J.OP2/1 2.51 ARG20:G.NH2/1
DG184:J.O4'/1 3.29 ARG42:G.NH1/1
DG185:J.OP1/1 3.01 SER87:H.N/1
DG185:J.OP1/1 3.11 THR88:H.N/1
DA196:J.OP1/1 3.11 ARG72:E.NH1/1
DA196:J.OP1/1 2.91 ARG72:E.NH2/1
DA196:J.OP1/1 2.67 PHE84:E.N/1
DA196:J.OP2/1 2.71 ARG72:E.NH2/1
DA206:J.OP1/1 3.02 ARG36:F.NH1/1
DG213:J.O3'/1 2.71 ARG42:E.NE/1
DG213:J.O3'/1 2.5 ARG42:E.NH2/1
DT215:J.O3'/1 3.33 ARG45:F.NH1/1
DG216:J.OP1/1 2.56 VAL117:E.N/1
DG216:J.OP1/1 2.95 THR118:E.N/1
DA227:J.OP1/1 2.78 ILE46:B.N/1
DA227:J.O3'/1 3.13 GLY44:A.N/1
DA228:J.OP1/1 3.06 GLY44:A.N/1
DA228:J.OP1/1 2.82 VAL46:A.N/1
DA228:J.OP1/1 3.09 ALA47:A.N/1
DA228:J.N3/1 3.25 ARG40:A.NH2/1
DC229:J.OP1/1 2.83 TYR41:A.N/1
DT236:J.OP1/1 2.62 ARG69:A.NH2/1
DT237:J.OP1/1 2.86 LYS64:A.N/1
DT237:J.OP2/1 3.35 LEU65:A.N/1
DG245:J.O3'/1 2.98 ARG83:A.NH1/1
DG245:J.O3'/1 2.63 ARG83:A.NH2/1
DC246:J.OP1/1 2.38 ARG83:A.NH2/1
DA247:J.OP1/1 2.85 LYS79:B.N/1
DT257:J.OP1/1 3.08 ALA45:C.N/1
DT257:J.O4'/1 2.94 ARG42:C.NH1/1
DA258:J.OP1/1 2.78 VAL43:C.N/1
DG266:J.OP1/1 2.56 TYR40:D.OH/1
DG266:J.O5'/1 2.77 TYR40:D.OH/1
DT267:J.OP1/1 2.57 ARG29:C.NH2/1
DT267:J.OP1/1 3.39 SER36:D.N/1
DT267:J.OP1/1 3.09 SER36:D.O/1
DT267:J.O4'/1 3.01 ARG33:D.NH1/1
DA268:J.OP1/1 2.61 LYS34:D.N/1
DA268:J.OP1/1 3.02 LYS34:D.O/1
DG275:J.O4'/1 3 ARG77:C.NH2/1
DC276:J.OP1/1 3.1 ARG77:C.N/1
DC276:J.OP2/1 3.16 THR76:C.N/1
DG288:J.OP1/1 3.11 ARG42:E.N/1
DG288:J.OP1/1 2.6 THR45:E.OG1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text