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Nucleic atom dist Protein atom
DC6:C.OP1/1 2.8 ARG159:B.NH1/1
DC6:C.OP1/1 2.72 VAL242:B.N/1
DC6:C.OP2/1 2.35 GLN156:B.NE2/1
DC6:C.OP2/1 2.99 ARG159:B.NH2/1
DT7:C.OP2/1 2.75 SER257:B.N/1
DT11:C.OP2/1 2.98 SER47:B.OG/1
DT11:C.OP2/1 2.83 ARG50:B.NH1/1
DA12:C.OP1/1 2.71 ARG81:B.NH2/1
DT13:C.OP2/1 2.99 ALA84:B.N/1
DA14:C.OP1/1 3.21 LYS132:B.N/1
DG15:C.N7/1 2.87 LYS86:B.NZ/1
DG15:C.N3/1 3.2 LYS201:B.NZ/1
DC16:C.OP1/1 3.07 ARG173:B.NE/1
DC16:C.OP1/1 3.01 ARG173:B.NH2/1
DC16:C.OP1/1 3.47 HIS289:B.NE2/1
DC16:C.OP1/1 2.86 ARG292:B.NE/1
DC16:C.O5'/1 3.12 ARG173:B.NH2/1
DT23:C.OP1/1 2.86 LYS122:B.NZ/1
DT23:C.OP2/1 2.81 SER38:A.N/1
DT23:C.OP2/1 2.57 THR41:A.OG1/1
DA24:C.OP2/1 2.87 HIS40:A.ND1/1
DA26:C.OP1/1 2.96 HIS289:A.N/1
DA26:C.OP2/1 2.63 GLU262:A.OE1/1
DG28:C.N7/1 2.77 ARG259:A.NH2/1
DG28:C.O6/1 2.89 ARG259:A.NE/1
DT3:D.O2/1 2.41 LYS244:A.NZ/1
DA5:D.O3'/1 2.69 VAL242:A.O/1
DC6:D.OP1/1 2.69 ARG159:A.NH1/1
DC6:D.OP1/1 3.09 ARG159:A.NH2/1
DC6:D.OP1/1 3.2 VAL242:A.N/1
DT11:D.OP2/1 2.96 SER47:A.OG/1
DT11:D.OP2/1 3.27 ARG50:A.NE/1
DT11:D.OP2/1 2.82 ARG50:A.NH2/1
DA12:D.OP1/1 2.37 ARG81:A.NH2/1
DA12:D.N3/1 3.3 ARG282:A.NH2/1
DT13:D.OP2/1 2.63 ALA84:A.N/1
DT13:D.OP2/1 2.7 THR87:A.OG1/1
DT13:D.O5'/1 2.95 THR87:A.OG1/1
DA14:D.OP1/1 2.96 LYS132:A.N/1
DG15:D.O6/1 2.54 LYS86:A.NZ/1
DC16:D.OP1/1 2.74 ARG173:A.NH1/1
DC16:D.OP1/1 2.93 ARG173:A.NH2/1
DT20:D.OP2/1 3.17 ARG106:B.NH2/1
DC22:D.OP1/1 3.21 ARG101:B.NH1/1
DC22:D.OP1/1 3.22 ARG118:A.NH2/2
DC22:D.OP2/1 2.51 ARG100:B.NH2/1
DC22:D.OP2/1 2.67 ARG101:B.NH1/1
DT23:D.OP2/1 2.82 SER38:B.N/1
DT23:D.OP2/1 2.53 THR41:B.OG1/1
DA24:D.OP2/1 3.3 HIS40:B.ND1/1
DT25:D.OP1/1 3.12 ALA175:B.N/1
DA26:D.OP1/1 2.68 SER287:B.OG/1
DA26:D.OP1/1 3.01 HIS289:B.N/1
DA26:D.OP2/1 2.51 GLU262:B.OE2/1
DA26:D.OP2/1 2.76 GLY288:B.N/1
DA26:D.O4'/1 3.13 ARG282:B.NH1/1
DC27:D.OP1/1 2.69 TYR283:B.N/1
DG28:D.N7/1 3.45 ARG259:B.NE/1
DG28:D.N7/1 2.59 ARG259:B.NH2/1
DG28:D.O6/1 2.52 ARG259:B.NE/1
DT33:D.O2/1 2.93 ARG243:B.NH2/1
DC6:C.OP1/2 2.8 ARG159:B.NH1/2
DC6:C.OP1/2 2.72 VAL242:B.N/2
DC6:C.OP2/2 2.35 GLN156:B.NE2/2
DC6:C.OP2/2 2.99 ARG159:B.NH2/2
DT7:C.OP2/2 2.75 SER257:B.N/2
DT11:C.OP2/2 2.98 SER47:B.OG/2
DT11:C.OP2/2 2.83 ARG50:B.NH1/2
DA12:C.OP1/2 2.71 ARG81:B.NH2/2
DT13:C.OP2/2 2.99 ALA84:B.N/2
DA14:C.OP1/2 3.21 LYS132:B.N/2
DG15:C.N7/2 2.87 LYS86:B.NZ/2
DG15:C.N3/2 3.2 LYS201:B.NZ/2
DC16:C.OP1/2 3.07 ARG173:B.NE/2
DC16:C.OP1/2 3.01 ARG173:B.NH2/2
DC16:C.OP1/2 3.47 HIS289:B.NE2/2
DC16:C.OP1/2 2.86 ARG292:B.NE/2
DC16:C.O5'/2 3.12 ARG173:B.NH2/2
DT23:C.OP1/2 2.86 LYS122:B.NZ/2
DT23:C.OP2/2 2.81 SER38:A.N/2
DT23:C.OP2/2 2.57 THR41:A.OG1/2
DA24:C.OP2/2 2.87 HIS40:A.ND1/2
DA26:C.OP1/2 2.96 HIS289:A.N/2
DA26:C.OP2/2 2.63 GLU262:A.OE1/2
DG28:C.N7/2 2.77 ARG259:A.NH2/2
DG28:C.O6/2 2.89 ARG259:A.NE/2
DT3:D.O2/2 2.41 LYS244:A.NZ/2
DA5:D.O3'/2 2.69 VAL242:A.O/2
DC6:D.OP1/2 2.69 ARG159:A.NH1/2
DC6:D.OP1/2 3.09 ARG159:A.NH2/2
DC6:D.OP1/2 3.2 VAL242:A.N/2
DT11:D.OP2/2 2.96 SER47:A.OG/2
DT11:D.OP2/2 3.27 ARG50:A.NE/2
DT11:D.OP2/2 2.82 ARG50:A.NH2/2
DA12:D.OP1/2 2.37 ARG81:A.NH2/2
DA12:D.N3/2 3.3 ARG282:A.NH2/2
DT13:D.OP2/2 2.63 ALA84:A.N/2
DT13:D.OP2/2 2.7 THR87:A.OG1/2
DT13:D.O5'/2 2.95 THR87:A.OG1/2
DA14:D.OP1/2 2.96 LYS132:A.N/2
DG15:D.O6/2 2.54 LYS86:A.NZ/2
DC16:D.OP1/2 2.74 ARG173:A.NH1/2
DC16:D.OP1/2 2.93 ARG173:A.NH2/2
DT20:D.OP2/2 3.17 ARG106:B.NH2/2
DC22:D.OP1/2 3.22 ARG118:A.NH2/1
DC22:D.OP1/2 3.21 ARG101:B.NH1/2
DC22:D.OP2/2 2.51 ARG100:B.NH2/2
DC22:D.OP2/2 2.67 ARG101:B.NH1/2
DT23:D.OP2/2 2.82 SER38:B.N/2
DT23:D.OP2/2 2.53 THR41:B.OG1/2
DA24:D.OP2/2 3.3 HIS40:B.ND1/2
DT25:D.OP1/2 3.12 ALA175:B.N/2
DA26:D.OP1/2 2.68 SER287:B.OG/2
DA26:D.OP1/2 3.01 HIS289:B.N/2
DA26:D.OP2/2 2.51 GLU262:B.OE2/2
DA26:D.OP2/2 2.76 GLY288:B.N/2
DA26:D.O4'/2 3.13 ARG282:B.NH1/2
DC27:D.OP1/2 2.69 TYR283:B.N/2
DG28:D.N7/2 3.45 ARG259:B.NE/2
DG28:D.N7/2 2.59 ARG259:B.NH2/2
DG28:D.O6/2 2.52 ARG259:B.NE/2
DT33:D.O2/2 2.93 ARG243:B.NH2/2
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:C.N3/1 2.54 39:C/1 3.12 ARG243:B.NH1/1
DA4:C.N3/1 2.54 39:C/1 3.07 LYS244:B.N/1
DA5:C.O4'/1 2.99 39:C/1 3.12 ARG243:B.NH1/1
DA5:C.O4'/1 2.99 39:C/1 3.07 LYS244:B.N/1
DA5:C.N3/1 2.57 418:B/1 2.4 ARG241:B.NH2/1
DA12:C.OP2/1 2.7 36:C/1 2.81 HIS91:B.NE2/1
DA24:C.N7/1 3.4 378:A/1 2.62 HIS40:A.O/1
DA24:C.N6/1 3.07 378:A/1 2.62 HIS40:A.O/1
DA4:D.N3/1 2.63 79:D/1 3.05 LYS244:A.N/1
DA5:D.O4'/1 2.62 79:D/1 3.05 LYS244:A.N/1
DA5:D.O3'/1 3.05 64:D/1 3.09 ARG241:A.NH1/1
DA24:D.N7/1 3.02 449:B/1 2.97 HIS40:B.O/1
DA26:D.N3/1 3.12 474:B/1 2.46 ARG282:B.NH2/1
DA4:C.N3/2 2.54 39:C/2 3.12 ARG243:B.NH1/2
DA4:C.N3/2 2.54 39:C/2 3.07 LYS244:B.N/2
DA5:C.O4'/2 2.99 39:C/2 3.12 ARG243:B.NH1/2
DA5:C.O4'/2 2.99 39:C/2 3.07 LYS244:B.N/2
DA5:C.N3/2 2.57 418:B/2 2.4 ARG241:B.NH2/2
DA12:C.OP2/2 2.7 36:C/2 2.81 HIS91:B.NE2/2
DA24:C.N7/2 3.4 378:A/2 2.62 HIS40:A.O/2
DA24:C.N6/2 3.07 378:A/2 2.62 HIS40:A.O/2
DA4:D.N3/2 2.63 79:D/2 3.05 LYS244:A.N/2
DA5:D.O4'/2 2.62 79:D/2 3.05 LYS244:A.N/2
DA5:D.O3'/2 3.05 64:D/2 3.09 ARG241:A.NH1/2
DA24:D.N7/2 3.02 449:B/2 2.97 HIS40:B.O/2
DA26:D.N3/2 3.12 474:B/2 2.46 ARG282:B.NH2/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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