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Nucleic atom dist Protein atom
G30:E.OP1/1 3.24 ASN280:B.N/1
A31:E.OP1/1 2.93 LYS297:B.NZ/1
A31:E.OP2/1 2.96 ASN280:B.ND2/1
U33:E.OP2/1 3.37 LYS222:B.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
A31:E.OP1/1 2.46 102:E/1 3.11 LYS297:B.NZ/1
C32:E.OP2/1 2.93 728:B/1 2.88 ARG329:B.NH1/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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