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Nucleic atom dist Protein atom
DG4:C.OP2/1 3.34 CYS431:A.N/1
DG4:C.N3/1 3.21 ARG491:A.NH1/1
DG5:C.OP1/1 2.58 TYR433:A.N/1
DG5:C.OP2/1 3.2 HIS432:A.ND1/1
DA6:C.OP1/1 2.99 LYS446:A.NZ/1
DA6:C.OP2/1 2.33 TYR433:A.OH/1
DA6:C.N7/1 2.96 LYS442:A.NZ/1
DC15:C.OP1/1 3.22 ARG470:B.NE/1
DC15:C.OP2/1 3.22 ARG477:B.NH1/1
DA8:D.OP1/1 2.78 ARG470:A.NE/1
DA8:D.OP1/1 3.1 ARG470:A.NH2/1
DA8:D.OP2/1 2.77 ARG477:A.NH1/1
DA8:D.OP2/1 3.03 ARG477:A.NH2/1
DA8:D.N7/1 3.08 ARG447:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG5:C.OP1/1 2.55 103:C/1 2.65 CYS431:A.O/1
DG5:C.OP1/1 2.55 103:C/1 3.01 GLY434:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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