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Nucleic atom dist Protein atom
DT2:C.O2/1 2.92 ASN348:A.ND2/1
DT3:C.OP1/1 2.66 THR210:A.N/1
DT3:C.OP1/1 2.87 THR210:A.OG1/1
DT3:C.OP1/1 2.72 SER216:A.OG/1
DT3:C.O4'/1 3.31 ASN348:A.ND2/1
DG4:C.OP1/1 2.95 LEU113:A.N/1
DG4:C.OP1/1 2.78 ARG350:A.NE/1
DG4:C.OP2/1 3.13 ARG350:A.NH2/1
DG4:C.N2/1 3.31 GLY218:A.O/1
DT5:C.OP2/1 2.64 ARG114:A.NE/1
DT5:C.OP2/1 3.17 ARG114:A.NH2/1
DT5:C.O5'/1 3.36 ARG114:A.NH2/1
DC6:C.O2/1 2.98 ARG222:A.NE/1
DC6:C.O2/1 2.79 ARG222:A.NH2/1
DA7:C.OP2/1 2.59 SER258:A.OG/1
DA7:C.O4'/1 2.83 ARG222:A.NH2/1
DA7:C.O3'/1 2.87 ARG229:A.NH2/1
DT8:C.OP1/1 2.99 ARG229:A.NH1/1
DT8:C.OP2/1 3.03 GLY68:A.N/2
DT8:C.O2/1 3.02 ASN106:A.ND2/2
DG9:C.OP1/1 2.76 HIS374:A.NE2/2
DG9:C.OP2/1 3.09 ARG69:A.N/2
DG9:C.O4'/1 2.95 ASN106:A.ND2/2
DG10:C.OP2/1 2.99 HIS374:A.N/2
DG10:C.O4'/1 3.27 LYS107:A.NZ/2
DG10:C.N7/1 2.44 ARG69:A.NH2/2
DG10:C.O6/1 3.35 ARG69:A.NH2/2
DG17:C.OP2/1 3.2 TYR28:A.OH/2
DC18:C.OP1/1 3.17 LYS26:A.N/2
DT8:D.OP2/1 2.72 ARG86:A.NH1/2
DT8:D.OP2/1 2.95 ARG86:A.NH2/2
DT9:D.OP2/1 2.67 LYS262:A.NZ/1
DC11:D.O2/1 2.58 ARG313:A.NH1/2
DT13:D.OP1/1 2.68 SER311:A.OG/2
DA17:D.OP2/1 3.17 LYS228:A.NZ/1
DT2:C.O2/2 2.92 ASN348:A.ND2/2
DT3:C.OP1/2 2.66 THR210:A.N/2
DT3:C.OP1/2 2.87 THR210:A.OG1/2
DT3:C.OP1/2 2.72 SER216:A.OG/2
DT3:C.O4'/2 3.31 ASN348:A.ND2/2
DG4:C.OP1/2 2.95 LEU113:A.N/2
DG4:C.OP1/2 2.78 ARG350:A.NE/2
DG4:C.OP2/2 3.13 ARG350:A.NH2/2
DG4:C.N2/2 3.31 GLY218:A.O/2
DT5:C.OP2/2 2.64 ARG114:A.NE/2
DT5:C.OP2/2 3.17 ARG114:A.NH2/2
DT5:C.O5'/2 3.36 ARG114:A.NH2/2
DC6:C.O2/2 2.98 ARG222:A.NE/2
DC6:C.O2/2 2.79 ARG222:A.NH2/2
DA7:C.OP2/2 2.59 SER258:A.OG/2
DA7:C.O4'/2 2.83 ARG222:A.NH2/2
DA7:C.O3'/2 2.87 ARG229:A.NH2/2
DT8:C.OP1/2 2.99 ARG229:A.NH1/2
DT8:C.OP2/2 3.03 GLY68:A.N/1
DT8:C.O2/2 3.02 ASN106:A.ND2/1
DG9:C.OP1/2 2.76 HIS374:A.NE2/1
DG9:C.OP2/2 3.09 ARG69:A.N/1
DG9:C.O4'/2 2.95 ASN106:A.ND2/1
DG10:C.OP2/2 2.99 HIS374:A.N/1
DG10:C.O4'/2 3.27 LYS107:A.NZ/1
DG10:C.N7/2 2.44 ARG69:A.NH2/1
DG10:C.O6/2 3.35 ARG69:A.NH2/1
DG17:C.OP2/2 3.2 TYR28:A.OH/1
DC18:C.OP1/2 3.17 LYS26:A.N/1
DT8:D.OP2/2 2.72 ARG86:A.NH1/1
DT8:D.OP2/2 2.95 ARG86:A.NH2/1
DT9:D.OP2/2 2.67 LYS262:A.NZ/2
DC11:D.O2/2 2.58 ARG313:A.NH1/1
DT13:D.OP1/2 2.68 SER311:A.OG/1
DA17:D.OP2/2 3.17 LYS228:A.NZ/2
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Nucleic atom d_n2w water d_p2w Protein atom
DT3:C.OP2/1 2.88 2085:A/1 2.91 SER216:A.O/1
DG4:C.OP2/1 2.69 2138:A/1 2.94 ARG350:A.O/1
DG4:C.OP2/1 2.69 2138:A/1 2.62 SER365:A.OG/1
DT5:C.OP1/1 2.81 2033:A/1 2.93 PRO115:A.O/1
DA7:C.OP2/1 2.89 2106:A/1 2.77 VAL260:A.N/1
DT8:C.OP1/1 2.77 2094:A/1 2.83 HIS66:A.O/2
DT8:C.OP1/1 2.77 2094:A/1 2.79 ASN103:A.ND2/2
DT8:C.OP2/1 2.99 2006:C/1 3 ALA71:A.N/2
DT8:C.O3'/1 2.92 2007:C/1 3.32 ASN103:A.ND2/2
DG9:C.OP1/1 2.8 2007:C/1 3.32 ASN103:A.ND2/2
DG9:C.N7/1 2.92 2008:C/1 3.16 GLU70:A.N/2
DA12:D.N3/1 2.64 2024:A/2 2.67 ASN106:A.O/2
DA12:D.N3/1 2.64 2024:A/2 3.1 ARG313:A.NH1/2
DT13:D.OP2/1 3.08 2122:A/2 3.05 SER312:A.N/2
DT13:D.OP2/1 3.08 2122:A/2 2.9 SER312:A.OG/2
DT13:D.O2/1 2.87 2005:D/1 2.9 SER105:A.O/2
DA15:D.OP1/1 3.04 2135:A/2 3.23 TRP337:A.NE1/2
DA17:D.OP1/1 2.74 396:A/1 2.79 ASP128:A.OD2/1
DA17:D.OP1/1 2.74 396:A/1 2.89 TYR129:A.O/1
DA17:D.OP1/1 2.74 396:A/1 3.22 GLU221:A.OE1/1
DA17:D.OP1/1 2.74 396:A/1 3.09 ASN224:A.ND2/1
DA17:D.OP2/1 2.86 2047:A/1 2.78 GLY131:A.N/1
DA17:D.OP2/1 2.86 2047:A/1 3.07 GLY131:A.O/1
DT3:C.OP2/2 2.88 2085:A/2 2.91 SER216:A.O/2
DG4:C.OP2/2 2.69 2138:A/2 2.94 ARG350:A.O/2
DG4:C.OP2/2 2.69 2138:A/2 2.62 SER365:A.OG/2
DT5:C.OP1/2 2.81 2033:A/2 2.93 PRO115:A.O/2
DA7:C.OP2/2 2.89 2106:A/2 2.77 VAL260:A.N/2
DT8:C.OP1/2 2.77 2094:A/2 2.83 HIS66:A.O/1
DT8:C.OP1/2 2.77 2094:A/2 2.79 ASN103:A.ND2/1
DT8:C.OP2/2 2.99 2006:C/2 3 ALA71:A.N/1
DT8:C.O3'/2 2.92 2007:C/2 3.32 ASN103:A.ND2/1
DG9:C.OP1/2 2.8 2007:C/2 3.32 ASN103:A.ND2/1
DG9:C.N7/2 2.92 2008:C/2 3.16 GLU70:A.N/1
DA12:D.N3/2 2.64 2024:A/1 2.67 ASN106:A.O/1
DA12:D.N3/2 2.64 2024:A/1 3.1 ARG313:A.NH1/1
DT13:D.OP2/2 3.08 2122:A/1 3.05 SER312:A.N/1
DT13:D.OP2/2 3.08 2122:A/1 2.9 SER312:A.OG/1
DT13:D.O2/2 2.87 2005:D/2 2.9 SER105:A.O/1
DA15:D.OP1/2 3.04 2135:A/1 3.23 TRP337:A.NE1/1
DA17:D.OP1/2 2.74 396:A/2 2.79 ASP128:A.OD2/2
DA17:D.OP1/2 2.74 396:A/2 2.89 TYR129:A.O/2
DA17:D.OP1/2 2.74 396:A/2 3.22 GLU221:A.OE1/2
DA17:D.OP1/2 2.74 396:A/2 3.09 ASN224:A.ND2/2
DA17:D.OP2/2 2.86 2047:A/2 2.78 GLY131:A.N/2
DA17:D.OP2/2 2.86 2047:A/2 3.07 GLY131:A.O/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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