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Nucleic atom dist Protein atom
DG19:N.OP1/1 3.25 LYS259:U.NZ/1
DT26:N.O2/1 3.47 ASN159:O.ND2/1
DA15:T.O4'/1 3.01 ALA832:A.O/1
DA47:T.OP1/1 2.76 ARG105:O.NH2/1
DA47:T.OP1/1 3.3 ARG253:U.NH1/1
DT48:T.O2/1 3.35 ASN69:O.ND2/1
DA49:T.OP1/1 3.27 LYS255:U.NZ/1
DA53:T.OP1/1 2.08 LYS272:M.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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