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Nucleic atom dist Protein atom
DC4:E.OP1/1 2.82 ARG272:A.NH1/1
DC4:E.OP1/1 2.68 ARG272:C.NH1/1
DT6:E.OP1/1 2.85 LYS43:A.NZ/1
DT6:E.OP1/1 2.85 LYS43:C.NZ/1
DT6:E.OP2/1 3.36 HIS46:C.NE2/1
DA7:E.OP2/1 2.88 HIS79:A.NE2/1
DA7:E.OP2/1 2.9 HIS79:C.NE2/1
DG8:E.OP1/1 2.94 HIS81:A.ND1/1
DG8:E.OP1/1 2.85 HIS81:C.ND1/1
DG8:E.OP2/1 2.88 GLY82:C.N/1
DG8:E.N2/1 3.19 ARG458:D.O/1
DG8:E.N3/1 3.29 LYS460:B.N/1
DG9:E.OP2/1 2.83 ARG122:A.NH1/1
DG9:E.OP2/1 2.85 ARG122:A.NH2/1
DT10:E.OP1/1 3.04 ASP437:B.N/1
DT10:E.OP1/1 2.88 SER438:B.N/1
DT10:E.OP1/1 2.69 ASP437:D.N/1
DT10:E.OP1/1 2.61 SER438:D.N/1
DT11:E.OP1/1 3.26 ARG458:B.NH2/1
DC14:E.OP1/1 3.17 ARG471:B.NE/1
DC14:E.OP1/1 2.76 ARG471:B.NH2/1
DC15:E.OP1/1 2.87 ASN463:D.N/1
DC15:E.OP1/1 2.7 ASN463:B.N/1
DG16:E.OP1/1 2.92 HIS515:B.NE2/1
DG16:E.OP2/1 2.67 ASN463:D.ND2/1
DG16:E.OP2/1 2.93 LYS466:D.NZ/1
DG16:E.OP2/1 2.86 ASN463:B.ND2/1
DG16:E.OP2/1 2.74 LYS466:B.NZ/1
DC17:E.OP1/1 2.7 ARG629:D.NE/1
DC17:E.OP1/1 2.79 GLY178:C.N/1
DC17:E.OP1/1 2.87 ARG629:B.NE/1
DC17:E.OP1/1 2.8 GLY178:A.N/1
DC17:E.OP2/1 2.92 ARG629:D.NH2/1
DC17:E.OP2/1 2.79 ARG629:B.NH2/1
DC19:E.OP1/1 3.31 ARG238:C.NH1/1
DC19:E.OP1/1 3.05 ARG238:A.NH1/1
DC19:E.OP1/1 2.86 ARG238:A.NH2/1
DC19:E.OP2/1 3.18 ARG238:C.NH2/1
DG4:F.OP1/1 2.55 ARG272:C.NH1/1
DG4:F.OP1/1 3.01 ARG272:A.NH1/1
DC5:F.OP1/1 2.95 ARG92:C.NE/1
DC5:F.OP1/1 2.03 ARG92:A.NH1/1
DG6:F.OP1/1 2.89 LYS43:C.NZ/1
DG6:F.OP1/1 3 LYS43:A.NZ/1
DG6:F.OP2/1 3.28 HIS46:C.NE2/1
DG6:F.OP2/1 2.44 ARG92:A.NH1/1
DG6:F.O5'/1 3.49 LYS43:A.NZ/1
DG7:F.OP2/1 2.86 HIS79:C.NE2/1
DG7:F.OP2/1 2.84 HIS79:A.NE2/1
DT8:F.OP1/1 2.83 HIS81:C.ND1/1
DT8:F.OP1/1 2.99 HIS81:A.ND1/1
DT8:F.OP2/1 2.8 GLY82:A.N/1
DT8:F.O2/1 2.78 LYS460:D.N/1
DT8:F.O2/1 2.73 LYS460:B.N/1
DG9:F.OP2/1 2.79 ARG122:C.NH2/1
DA10:F.OP1/1 2.76 SER438:D.N/1
DA10:F.OP1/1 2.91 ASP437:B.N/1
DA10:F.OP1/1 2.78 SER438:B.N/1
DA10:F.OP1/1 3.15 SER438:B.OG/1
DA10:F.O3'/1 2.99 ARG458:B.NH2/1
DT14:F.OP1/1 3.21 ARG471:B.NH2/1
DA15:F.OP1/1 2.9 ASN463:B.N/1
DA15:F.OP1/1 2.82 ASN463:D.N/1
DC16:F.OP1/1 3.13 HIS515:D.NE2/1
DC16:F.OP2/1 2.79 ASN463:B.ND2/1
DC16:F.OP2/1 2.68 LYS466:B.NZ/1
DC16:F.OP2/1 2.61 ASN463:D.ND2/1
DC16:F.OP2/1 2.65 LYS466:D.NZ/1
DG17:F.OP1/1 2.87 ARG629:B.NE/1
DG17:F.OP1/1 2.89 GLY178:A.N/1
DG17:F.OP1/1 2.67 ARG629:D.NE/1
DG17:F.OP1/1 2.9 GLY178:C.N/1
DG17:F.OP2/1 2.99 ARG629:B.NH2/1
DG17:F.OP2/1 3.17 ARG629:D.NH2/1
DC19:F.OP1/1 2.91 ARG238:A.NH1/1
DC19:F.OP1/1 3.03 ARG238:A.NH2/1
DC19:F.OP1/1 3 ARG238:C.NH1/1
DC19:F.OP2/1 3.12 ARG238:A.NH2/1
DC19:F.OP2/1 3.32 ARG238:C.NH2/1
DT20:F.OP1/1 3.01 SER330:C.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC4:E.OP1/1 2.96 638:C/1 2.77 ASN269:C.ND2/1
DG5:E.N2/1 3.19 561:A/1 2.96 ILE175:A.O/1
DG5:E.N3/1 3.28 206:F/1 2.85 ILE175:A.N/1
DG5:E.N3/1 2.89 208:F/1 3.13 ILE175:C.N/1
DT6:E.OP1/1 2.84 207:F/1 2.92 SER173:C.N/1
DT6:E.O4'/1 3.03 115:E/1 3.17 LYS43:A.NZ/1
DA7:E.OP1/1 2.78 113:E/1 2.95 ALA32:A.O/1
DA7:E.OP1/1 2.61 204:F/1 3.1 ARG33:A.O/1
DA7:E.OP1/1 2.78 113:E/1 2.99 ARG33:A.NE/1
DA7:E.OP1/1 2.61 204:F/1 2.86 VAL45:A.N/1
DA7:E.OP1/1 2.52 106:E/1 3.11 ARG33:C.O/1
DA7:E.OP1/1 2.52 106:E/1 3 VAL45:C.N/1
DA7:E.N3/1 2.95 1101:D/1 2.39 LYS460:D.NZ/1
DG9:E.OP1/1 2.48 105:E/1 2.77 ASP508:B.OD2/1
DG9:E.OP1/1 2.67 203:F/1 2.64 ASP508:D.OD2/1
DT10:E.OP1/1 2.74 111:E/1 3.03 ALA439:B.N/1
DT10:E.OP1/1 3 1117:D/1 2.74 ALA439:D.N/1
DT11:E.OP2/1 2.77 112:E/1 3.16 ASP437:D.OD2/1
DC15:E.OP1/1 2.84 205:F/1 3.21 ASN463:B.O/1
DC15:E.O2/1 2.78 1101:D/1 2.39 LYS460:D.NZ/1
DC15:E.O2/1 2.45 104:E/1 2.87 TYR25:C.OH/1
DC15:E.O2/1 2.66 516:A/1 2.62 TYR25:A.OH/1
DA18:E.OP1/1 2.83 621:C/1 2.66 GLY178:C.O/1
DA18:E.OP1/1 2.95 209:F/1 3.18 ALA180:C.N/1
DA18:E.OP1/1 3.2 532:A/1 2.7 ALA180:A.N/1
DC5:F.OP1/1 2.75 103:E/1 1.72 ARG92:A.NH1/1
DC5:F.OP2/1 3.15 217:F/1 3.29 ARG92:A.NH2/1
DC5:F.O4'/1 2.92 206:F/1 2.85 ILE175:A.N/1
DC5:F.O2/1 2.8 208:F/1 3.13 ILE175:C.N/1
DC5:F.O2/1 2.77 206:F/1 2.85 ILE175:A.N/1
DG6:F.OP1/1 2.78 207:F/1 2.92 SER173:C.N/1
DG6:F.OP1/1 3.23 506:A/1 2.43 ARG92:A.NE/1
DG6:F.OP1/1 3.23 506:A/1 2.89 TYR99:A.OH/1
DG6:F.OP2/1 2.24 103:E/1 1.02 ARG92:A.NH1/1
DG6:F.O4'/1 3.07 115:E/1 3.17 LYS43:A.NZ/1
DG6:F.N2/1 3.25 1101:D/1 2.39 LYS460:D.NZ/1
DG6:F.N2/1 3.1 216:F/1 3.24 ARG33:C.NH1/1
DG7:F.OP1/1 2.53 106:E/1 3.11 ARG33:C.O/1
DG7:F.OP1/1 2.53 106:E/1 3 VAL45:C.N/1
DG7:F.OP1/1 2.78 113:E/1 2.95 ALA32:A.O/1
DG7:F.OP1/1 2.59 204:F/1 3.1 ARG33:A.O/1
DG7:F.OP1/1 2.78 113:E/1 2.99 ARG33:A.NE/1
DG7:F.OP1/1 2.59 204:F/1 2.86 VAL45:A.N/1
DG7:F.N3/1 3.09 1101:D/1 2.39 LYS460:D.NZ/1
DG9:F.OP1/1 2.54 203:F/1 2.64 ASP508:D.OD2/1
DG9:F.OP1/1 2.62 105:E/1 2.77 ASP508:B.OD2/1
DA10:F.OP1/1 2.85 1117:D/1 2.74 ALA439:D.N/1
DA10:F.OP1/1 2.93 111:E/1 3.03 ALA439:B.N/1
DA15:F.OP1/1 2.68 205:F/1 3.21 ASN463:B.O/1
DA15:F.N3/1 3.36 516:A/1 2.62 TYR25:A.OH/1
DA15:F.N3/1 2.87 104:E/1 2.87 TYR25:C.OH/1
DC16:F.OP1/1 2.93 824:B/1 2.81 LYS466:B.NZ/1
DC16:F.OP1/1 2.86 1104:D/1 2.54 LEU621:D.O/1
DC16:F.O2/1 2.37 201:F/1 3.03 ILE175:A.O/1
DC16:F.O2/1 2.1 201:F/1 2.97 ILE175:A.O/1
DC16:F.O2/1 2.37 201:F/1 3.22 ALA176:A.O/1
DC16:F.O2/1 2.1 201:F/1 3.05 ALA176:A.O/1
DG18:F.OP1/1 2.95 109:E/1 2.94 GLY178:A.O/1
DG18:F.OP1/1 2.73 621:C/1 2.66 GLY178:C.O/1
DG18:F.OP1/1 2.89 209:F/1 3.18 ALA180:C.N/1
DC19:F.OP1/1 3.09 609:C/1 2.56 GLY332:C.O/1
DC19:F.O3'/1 3 107:E/1 2.89 SER240:C.OG/1
DT20:F.OP1/1 2.68 107:E/1 2.89 SER240:C.OG/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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