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Nucleic atom dist Protein atom
DG-301:J.O3'/1 2.8 ARG49:K.NE/1
DA-299:J.OP1/1 2.91 LYS56:K.NZ/1
DC-289:J.OP1/1 2.71 SER53:R.N/1
DA-288:J.OP2/1 2.56 TYR39:R.OH/1
DA-288:J.OP2/1 3.33 ILE51:R.N/1
DG-279:J.OP1/1 3.19 ARG32:Q.NH1/1
DA-278:J.OP2/1 2.8 ARG17:Q.NE/1
DA-278:J.OP2/1 2.95 ARG17:Q.NH2/1
DG-277:J.OP2/1 2.96 ARG20:Q.NH2/1
DG-270:J.O3'/1 3.27 ARG42:Q.NH1/1
DA-269:J.OP1/1 2.73 SER84:R.N/1
DA-269:J.O5'/1 3.22 ARG83:R.NE/1
DG-268:J.OP2/1 2.8 ARG83:R.NH2/1
DT-258:J.OP1/1 3.31 ARG72:O.NH1/1
DT-258:J.OP1/1 3.22 ARG72:O.NH2/1
DT-258:J.OP1/1 2.72 PHE84:O.N/1
DT-258:J.OP2/1 3.04 ARG72:O.NH2/1
DA-248:J.OP1/1 3.05 ARG36:P.NH2/1
DA-248:J.OP1/1 2.64 ARG63:O.NH1/1
DA-248:J.OP2/1 3.42 ARG36:P.NH1/1
DG-240:J.OP1/1 3.09 ARG42:O.NH2/1
DA-238:J.OP1/1 2.56 VAL117:O.N/1
DA-238:J.OP1/1 2.98 THR118:O.N/1
DA-238:J.OP1/1 3.15 THR118:O.OG1/1
DC-228:J.OP2/1 3.35 GLY48:L.N/1
DG-227:J.OP1/1 2.82 ILE46:L.N/1
DG-227:J.O3'/1 3.3 GLY44:K.N/1
DT-226:J.OP1/1 2.98 GLY44:K.N/1
DT-226:J.OP1/1 2.68 VAL46:K.N/1
DT-226:J.OP1/1 3.29 ALA47:K.N/1
DT-226:J.O2/1 3.32 ARG40:K.NH1/1
DG-225:J.OP1/1 2.95 TYR41:K.N/1
DG-225:J.O4'/1 3.03 ARG40:K.NH2/1
DA-218:J.OP2/1 2.77 ARG69:K.NH2/1
DG-217:J.OP1/1 2.73 LYS64:K.N/1
DG-217:J.OP2/1 2.98 LEU65:K.N/1
DA-207:J.OP1/1 2.68 LYS79:L.N/1
DA-207:J.OP1/1 2.61 THR80:L.OG1/1
DG-197:J.OP1/1 2.98 ALA45:M.N/1
DA-196:J.OP1/1 3.2 ARG35:M.NE/1
DA-196:J.OP1/1 2.93 VAL43:M.N/1
DA-196:J.OP2/1 2.24 ARG35:M.NH2/1
DG-187:J.OP1/1 2.53 TYR37:N.OH/1
DG-187:J.O3'/1 2.98 ARG29:M.NH1/1
DC-186:J.OP1/1 3.2 SER33:N.N/1
DC-186:J.OP1/1 2.85 ARG29:M.NH2/1
DG-185:J.OP1/1 3.26 LYS31:N.N/1
DG-185:J.OP2/1 2.8 LYS31:N.NZ/1
DC-177:J.OP1/1 2.79 ARG77:M.N/1
DC-177:J.OP2/1 3.09 THR76:M.N/1
DC-165:J.OP1/1 2.47 ARG42:O.N/1
DC-165:J.OP1/1 3.08 THR45:O.OG1/1
DG-145:J.O3'/1 2.8 ARG49:A.NE/1
DA-143:J.OP1/1 2.91 LYS56:A.NZ/1
DC-133:J.OP1/1 2.71 SER53:H.N/1
DA-132:J.OP2/1 2.56 TYR39:H.OH/1
DA-132:J.OP2/1 3.33 ILE51:H.N/1
DG-123:J.OP1/1 3.19 ARG32:G.NH1/1
DA-122:J.OP2/1 2.8 ARG17:G.NE/1
DA-122:J.OP2/1 2.96 ARG17:G.NH2/1
DG-121:J.OP2/1 2.96 ARG20:G.NH2/1
DG-114:J.O3'/1 3.27 ARG42:G.NH1/1
DA-113:J.OP1/1 2.73 SER84:H.N/1
DA-113:J.O5'/1 3.22 ARG83:H.NE/1
DG-112:J.OP2/1 2.8 ARG83:H.NH2/1
DT-102:J.OP1/1 3.31 ARG72:E.NH1/1
DT-102:J.OP1/1 3.22 ARG72:E.NH2/1
DT-102:J.OP1/1 2.72 PHE84:E.N/1
DT-102:J.OP2/1 3.04 ARG72:E.NH2/1
DA-92:J.OP1/1 3.05 ARG36:F.NH2/1
DA-92:J.OP1/1 2.64 ARG63:E.NH1/1
DA-92:J.OP2/1 3.42 ARG36:F.NH1/1
DG-84:J.OP1/1 3.09 ARG42:E.NH2/1
DA-82:J.OP1/1 2.56 VAL117:E.N/1
DA-82:J.OP1/1 2.98 THR118:E.N/1
DA-82:J.OP1/1 3.15 THR118:E.OG1/1
DC-72:J.OP2/1 3.35 GLY48:B.N/1
DG-71:J.OP1/1 2.82 ILE46:B.N/1
DG-71:J.O3'/1 3.3 GLY44:A.N/1
DT-70:J.OP1/1 2.98 GLY44:A.N/1
DT-70:J.OP1/1 2.68 VAL46:A.N/1
DT-70:J.OP1/1 3.29 ALA47:A.N/1
DT-70:J.O2/1 3.32 ARG40:A.NH1/1
DG-69:J.OP1/1 2.95 TYR41:A.N/1
DG-69:J.O4'/1 3.03 ARG40:A.NH2/1
DA-62:J.OP2/1 2.77 ARG69:A.NH2/1
DG-61:J.OP1/1 2.73 LYS64:A.N/1
DG-61:J.OP2/1 2.98 LEU65:A.N/1
DA-51:J.OP1/1 2.68 LYS79:B.N/1
DA-51:J.OP1/1 2.61 THR80:B.OG1/1
DG-41:J.OP1/1 2.98 ALA45:C.N/1
DA-40:J.OP1/1 3.2 ARG35:C.NE/1
DA-40:J.OP1/1 2.93 VAL43:C.N/1
DA-40:J.OP2/1 2.24 ARG35:C.NH2/1
DG-31:J.OP1/1 2.53 TYR37:D.OH/1
DG-31:J.O3'/1 2.98 ARG29:C.NH1/1
DC-30:J.OP1/1 3.2 SER33:D.N/1
DC-30:J.OP1/1 2.85 ARG29:C.NH2/1
DG-29:J.OP1/1 3.26 LYS31:D.N/1
DG-29:J.OP2/1 2.8 LYS31:D.NZ/1
DC-21:J.OP1/1 2.79 ARG77:C.N/1
DC-21:J.OP2/1 3.09 THR76:C.N/1
DC-9:J.OP1/1 2.86 ARG42:E.N/1
DT14:I.OP1/1 3.05 ARG49:E.NE/1
DA25:I.OP1/1 3.22 SER53:D.N/1
DG26:I.OP1/1 3.34 ILE51:D.N/1
DG26:I.OP2/1 2.02 TYR39:D.OH/1
DA34:I.OP1/1 3.02 ARG30:D.NH1/1
DA35:I.OP1/1 2.7 ARG32:C.NH1/1
DT36:I.OP1/1 3.29 ARG17:C.NE/1
DT36:I.OP2/1 2.51 ARG17:C.NH2/1
DG45:I.OP1/1 2.55 SER84:D.N/1
DG45:I.OP1/1 2.55 THR85:D.OG1/1
DG45:I.O5'/1 3.24 ARG83:D.NH2/1
DG55:I.OP2/1 2.83 SER86:A.N/1
DG55:I.O5'/1 3.11 PHE84:A.O/1
DC56:I.OP1/1 2.82 ARG72:A.NH1/1
DC56:I.OP1/1 2.78 PHE84:A.N/1
DC56:I.OP2/1 2.61 ARG72:A.NH2/1
DA66:I.OP1/1 3.22 ARG36:B.NH1/1
DA66:I.OP1/1 3.1 ARG36:B.NH2/1
DA66:I.OP1/1 2.8 ARG63:A.NH1/1
DA66:I.OP2/1 3.26 ARG36:B.NH1/1
DA74:I.OP1/1 2.83 ARG42:A.NE/1
DA74:I.OP1/1 2.58 ARG42:A.NH2/1
DG76:I.OP1/1 2.68 VAL117:A.N/1
DG76:I.OP1/1 3.09 THR118:A.N/1
DG76:I.OP1/1 2.95 THR118:A.OG1/1
DC86:I.OP1/1 3.28 GLY48:F.N/1
DC86:I.O4'/1 2.8 ARG45:F.NH2/1
DC87:I.OP1/1 2.88 ILE46:F.N/1
DC87:I.O3'/1 3.06 GLY44:E.N/1
DG88:I.OP1/1 2.82 GLY44:E.N/1
DG88:I.OP1/1 2.83 VAL46:E.N/1
DG88:I.OP1/1 3.2 ALA47:E.N/1
DG88:I.N3/1 2.73 ARG40:E.NH2/1
DC89:I.OP1/1 2.72 TYR41:E.N/1
DA96:I.OP2/1 2.78 ARG69:E.NH2/1
DC97:I.OP1/1 2.96 LYS64:E.N/1
DC97:I.OP2/1 3.1 LEU65:E.N/1
DG105:I.O3'/1 3.45 ARG83:E.NH2/1
DG106:I.OP1/1 3.19 LYS79:F.NZ/1
DG107:I.OP1/1 2.51 LYS79:F.N/1
DG107:I.OP1/1 3.09 THR80:F.OG1/1
DT109:I.OP1/1 2.36 THR29:D.OG1/1
DA118:I.OP1/1 3.06 VAL43:G.N/1
DG127:I.OP1/1 2.63 TYR37:H.OH/1
DG127:I.N2/1 3.07 ARG30:H.NH1/1
DG127:I.N3/1 3.46 ARG30:H.NH2/1
DC128:I.OP1/1 2.47 ARG29:G.NH2/1
DA129:I.OP1/1 2.76 THR29:H.O/1
DA129:I.OP1/1 2.5 LYS31:H.N/1
DG137:I.OP1/1 3.09 ARG77:G.N/1
DC149:I.OP1/1 2.91 ARG42:A.N/1
DC149:I.OP1/1 2.8 THR45:A.OG1/1
DA168:I.OP1/1 3.06 HIS39:O.N/1
DT170:I.OP1/1 3.05 ARG49:O.NE/1
DA181:I.OP1/1 3.22 SER53:N.N/1
DG182:I.OP1/1 3.34 ILE51:N.N/1
DG182:I.OP2/1 2.02 TYR39:N.OH/1
DA190:I.OP1/1 3.02 ARG30:N.NH1/1
DA191:I.OP1/1 2.7 ARG32:M.NH1/1
DT192:I.OP1/1 3.28 ARG17:M.NE/1
DT192:I.OP2/1 2.51 ARG17:M.NH2/1
DG201:I.OP1/1 2.55 SER84:N.N/1
DG201:I.OP1/1 2.55 THR85:N.OG1/1
DG201:I.O5'/1 3.24 ARG83:N.NH2/1
DG211:I.OP2/1 2.83 SER86:K.N/1
DG211:I.O5'/1 3.11 PHE84:K.O/1
DC212:I.OP1/1 2.82 ARG72:K.NH1/1
DC212:I.OP1/1 2.78 PHE84:K.N/1
DC212:I.OP2/1 2.62 ARG72:K.NH2/1
DA222:I.OP1/1 3.22 ARG36:L.NH1/1
DA222:I.OP1/1 3.1 ARG36:L.NH2/1
DA222:I.OP1/1 2.8 ARG63:K.NH1/1
DA222:I.OP2/1 3.26 ARG36:L.NH1/1
DA230:I.OP1/1 2.83 ARG42:K.NE/1
DA230:I.OP1/1 2.58 ARG42:K.NH2/1
DG232:I.OP1/1 2.68 VAL117:K.N/1
DG232:I.OP1/1 3.09 THR118:K.N/1
DG232:I.OP1/1 2.95 THR118:K.OG1/1
DC242:I.OP1/1 3.28 GLY48:P.N/1
DC242:I.O4'/1 2.8 ARG45:P.NH2/1
DC243:I.OP1/1 2.88 ILE46:P.N/1
DC243:I.O3'/1 3.06 GLY44:O.N/1
DG244:I.OP1/1 2.82 GLY44:O.N/1
DG244:I.OP1/1 2.83 VAL46:O.N/1
DG244:I.OP1/1 3.2 ALA47:O.N/1
DG244:I.N3/1 2.73 ARG40:O.NH2/1
DC245:I.OP1/1 2.72 TYR41:O.N/1
DA252:I.OP2/1 2.78 ARG69:O.NH2/1
DC253:I.OP1/1 2.96 LYS64:O.N/1
DC253:I.OP2/1 3.1 LEU65:O.N/1
DG261:I.O3'/1 3.45 ARG83:O.NH2/1
DG262:I.OP1/1 3.19 LYS79:P.NZ/1
DG263:I.OP1/1 2.51 LYS79:P.N/1
DG263:I.OP1/1 3.09 THR80:P.OG1/1
DT265:I.OP1/1 2.36 THR29:N.OG1/1
DA274:I.OP1/1 3.06 VAL43:Q.N/1
DG283:I.OP1/1 2.63 TYR37:R.OH/1
DG283:I.N2/1 3.07 ARG30:R.NH1/1
DG283:I.N3/1 3.46 ARG30:R.NH2/1
DC284:I.OP1/1 2.47 ARG29:Q.NH2/1
DA285:I.OP1/1 2.76 THR29:R.O/1
DA285:I.OP1/1 2.5 LYS31:R.N/1
DG293:I.OP1/1 3.09 ARG77:Q.N/1
DC305:I.OP1/1 2.37 ARG42:K.N/1
DC305:I.OP1/1 3.24 THR45:K.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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