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Nucleic atom dist Protein atom
DG3:T.O3'/1 3.29 LYS450:A.NZ/1
DC4:T.OP1/1 2.75 LYS450:A.NZ/1
DA5:T.OP1/1 2.87 ARG442:A.NH2/1
DA5:T.OP2/1 2.99 ARG442:A.NE/1
DA5:T.N3/1 3.2 ARG445:A.NH1/1
DT6:T.OP1/1 2.84 ARG449:A.NE/1
DT6:T.O2/1 3.11 ARG445:A.NH1/1
DA7:T.OP1/1 3.34 ASN457:A.ND2/1
DA7:T.N3/1 3.16 ARG387:A.NH1/1
DC8:T.OP1/1 3.16 HIS459:A.NE2/1
DG9:T.OP1/1 2.71 GLU386:A.N/1
DG9:T.OP1/1 2.98 ARG387:A.N/1
DG2:P.OP1/1 2.8 GLY247:A.N/1
DG2:P.OP1/1 3.13 THR250:A.N/1
DG2:P.OP1/1 2.64 THR250:A.OG1/1
DT3:P.OP1/1 2.81 GLY245:A.N/1
DA4:P.OP1/1 2.88 ARG416:A.NH2/1
DA4:P.OP1/1 2.89 ARG416:A.NH2/1
DT5:P.OP1/1 2.65 ASP330:A.OD2/1
DT5:P.OP1/1 3.16 ASP332:A.OD1/1
DT5:P.OP1/1 3.08 ASP332:A.OD2/1
DG1:D.OP1/1 2.78 ARG175:A.NE/1
DG1:D.OP2/1 3.34 ARG175:A.NH2/1
DG1:D.N3/1 2.52 THR178:A.OG1/1
DC2:D.OP1/1 2.93 GLY206:A.N/1
DC2:D.OP1/1 2.89 SER209:A.N/1
DC2:D.OP1/1 2.67 SER209:A.OG/1
DC2:D.OP2/1 3.04 HIS208:A.N/1
DC3:D.OP1/1 3.08 HIS204:A.N/1
DC3:D.OP1/1 2.91 HIS204:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC4:T.O2/1 2.73 111:T/1 2.98 ARG181:A.NH1/1
DC4:T.O2/1 2.73 111:T/1 2.94 ARG181:A.NH2/1
DA5:T.OP2/1 2.76 694:A/1 2.8 ARG181:A.NH2/1
DA5:T.OP2/1 2.76 694:A/1 2.74 GLU443:A.OE2/1
DA5:T.OP2/1 2.76 694:A/1 2.9 ARG446:A.NE/1
DT6:T.OP1/1 2.77 114:T/1 2.94 ARG445:A.O/1
DT6:T.OP1/1 2.76 615:A/1 2.51 ARG449:A.NH2/1
DT6:T.OP1/1 2.77 114:T/1 2.83 LEU456:A.N/1
DC8:T.O2/1 2.78 202:P/1 2.78 ARG387:A.NH1/1
DG9:T.O3'/1 2.61 105:T/1 2.83 ARG387:A.O/1
DG2:P.OP2/1 2.65 203:P/1 3 LYS249:A.N/1
DG2:P.N3/1 2.9 213:P/1 3.49 GLN275:A.NE2/1
DA4:P.OP1/1 2.88 206:P/1 3.13 HIS329:A.NE2/1
DA4:P.OP1/1 2.74 604:A/1 2.36 ASP330:A.OD2/1
DA4:P.OP1/1 2.88 206:P/1 2.86 ARG416:A.NE/1
DA4:P.OP1/1 2.76 206:P/1 3.13 HIS329:A.NE2/1
DA4:P.OP1/1 2.84 604:A/1 2.36 ASP330:A.OD2/1
DA4:P.OP1/1 2.76 206:P/1 2.86 ARG416:A.NE/1
DT5:P.O4/1 2.7 639:A/1 2.59 LYS438:A.NZ/1
DG1:D.OP2/1 2.33 102:D/1 1.96 ARG175:A.NE/1
DG1:D.OP2/1 2.33 102:D/1 1.08 ARG175:A.NH2/1
DG1:D.N7/1 2.71 111:D/1 3.45 ARG175:A.NE/1
DG1:D.N7/1 2.71 111:D/1 2.02 ARG175:A.NH1/1
DC3:D.OP1/1 2.33 103:D/1 2.6 LEU202:A.O/1
DC3:D.OP1/1 2.74 103:D/1 2.6 LEU202:A.O/1
DC3:D.OP1/1 2.74 103:D/1 3.13 PHE205:A.O/1
DG4:D.OP1/1 2.72 112:D/1 3.12 ARG446:A.NH1/1
DG4:D.OP1/1 2.72 112:D/1 3.15 ARG446:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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