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Nucleic atom dist Protein atom
DG3:T.O3'/1 3.25 LYS450:A.NZ/1
DC4:T.OP1/1 2.85 LYS450:A.NZ/1
DA5:T.OP1/1 2.8 ARG442:A.NH2/1
DA5:T.OP2/1 3.01 ARG442:A.NE/1
DA5:T.N3/1 3.23 ARG445:A.NH1/1
DT6:T.OP1/1 2.8 ARG449:A.NE/1
DT6:T.O2/1 3.15 ARG445:A.NH1/1
DA7:T.OP1/1 3.36 ASN457:A.ND2/1
DA7:T.N3/1 3.16 ARG387:A.NH1/1
DC8:T.OP1/1 3.15 HIS459:A.NE2/1
DG9:T.OP1/1 2.7 GLU386:A.N/1
DG9:T.OP1/1 3.03 ARG387:A.N/1
DG2:P.OP1/1 2.82 GLY247:A.N/1
DG2:P.OP1/1 3.11 THR250:A.N/1
DG2:P.OP1/1 2.5 THR250:A.OG1/1
DT3:P.OP1/1 2.72 GLY245:A.N/1
DA4:P.OP1/1 2.81 ARG416:A.NH2/1
DT5:P.OP1/1 2.85 ASP330:A.OD1/1
DT5:P.OP1/1 3.07 ASP332:A.OD2/1
DG1:D.OP1/1 2.67 ARG175:A.NE/1
DG1:D.OP2/1 3.18 ARG175:A.NH2/1
DG1:D.N3/1 2.48 THR178:A.OG1/1
DC2:D.OP1/1 3 GLY206:A.N/1
DC2:D.OP1/1 2.87 SER209:A.N/1
DC2:D.OP1/1 2.8 SER209:A.OG/1
DC2:D.OP2/1 3.18 HIS208:A.N/1
DC3:D.OP1/1 3.09 HIS204:A.N/1
DC3:D.OP1/1 3 HIS204:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC4:T.O2/1 2.76 111:T/1 2.95 ARG181:A.NH1/1
DC4:T.O2/1 2.76 111:T/1 2.94 ARG181:A.NH2/1
DA5:T.OP2/1 2.76 693:A/1 2.84 ARG181:A.NH2/1
DA5:T.OP2/1 2.76 693:A/1 2.74 GLU443:A.OE2/1
DA5:T.OP2/1 2.76 693:A/1 2.96 ARG446:A.NE/1
DT6:T.OP1/1 2.85 737:A/1 2.89 ARG445:A.O/1
DT6:T.OP1/1 2.45 102:T/1 2.48 ARG449:A.NH2/1
DT6:T.OP1/1 2.85 737:A/1 2.9 LEU456:A.N/1
DC8:T.O2/1 2.91 102:P/1 2.77 ARG387:A.NH1/1
DG9:T.O3'/1 2.86 727:A/1 2.82 ARG387:A.O/1
DG2:P.OP2/1 2.64 104:P/1 3.08 LYS249:A.N/1
DG2:P.N3/1 2.94 112:P/1 3.33 GLN275:A.NE2/1
DA4:P.OP1/1 2.79 627:A/1 2.55 ASP330:A.OD2/1
DA4:P.OP1/1 2.63 103:P/1 2.86 ARG416:A.NE/1
DT5:P.OP1/1 2.98 709:A/1 2.95 ASP330:A.OD1/1
DT5:P.OP1/1 2.98 709:A/1 2.78 ASP330:A.OD2/1
DT5:P.O4/1 2.72 612:A/1 2.46 LYS438:A.NZ/1
DG1:D.OP1/1 2.26 101:D/1 1.09 ARG175:A.NH2/1
DG1:D.OP2/1 2.37 102:D/1 2.31 ARG175:A.NE/1
DG1:D.OP2/1 2.37 102:D/1 1.37 ARG175:A.NH2/1
DG1:D.N7/1 2.68 108:D/1 2.2 ARG175:A.NH1/1
DC3:D.OP1/1 2.61 107:D/1 2.69 LEU202:A.O/1
DC3:D.OP1/1 2.72 107:D/1 2.69 LEU202:A.O/1
DC3:D.O4'/1 3.04 109:D/1 3.2 ARG446:A.NH1/1
DG4:D.OP1/1 2.79 111:D/1 3.14 ARG446:A.NH1/1
DG4:D.OP1/1 2.79 111:D/1 3 ARG446:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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