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Nucleic atom dist Protein atom
DC517:C.N4/1 3.39 ARG447:B.NH2/1
DT521:C.OP2/1 3.39 CYS431:A.N/1
DG522:C.OP1/1 2.87 TYR433:A.N/1
DG522:C.OP2/1 2.88 HIS432:A.ND1/1
DA523:C.OP2/1 2.69 TYR433:A.OH/1
DA523:C.OP2/1 2.96 LYS446:A.NZ/1
DG507:D.OP1/1 2.82 ARG470:A.NE/1
DG507:D.OP1/1 3.3 ARG470:A.NH2/1
DG507:D.OP1/1 2.5 LYS471:A.NZ/1
DG507:D.OP2/1 2.76 ARG477:A.NH1/1
DG507:D.OP2/1 2.94 ARG477:A.NH2/1
DG507:D.N7/1 3.11 ARG447:A.NH1/1
DC511:D.OP1/1 2.9 CYS431:B.N/1
DA512:D.OP1/1 2.72 TYR433:B.N/1
DA512:D.OP2/1 2.9 HIS432:B.ND1/1
DG513:D.OP1/1 3.42 LYS446:B.NZ/1
DG513:D.OP2/1 2.64 TYR433:B.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT506:D.OP1/1 2.71 601:D/1 2.79 ARG470:A.O/1
DT506:D.OP1/1 2.71 601:D/1 2.83 ARG477:A.NH1/1
DG507:D.OP2/1 2.97 704:A/1 2.82 SER440:A.O/1
DG507:D.OP2/1 2.97 704:A/1 2.67 ARG447:A.NH2/1
DA508:D.OP2/1 3.01 712:A/1 2.96 SER440:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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