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Nucleic atom dist Protein atom
DA-54:I.OP1/1 3.36 SER53:D.N/1
DA-54:I.OP2/1 2.82 SER53:D.OG/1
DG-42:I.OP1/1 3.03 ARG17:C.N/1
DG-42:I.OP2/1 3.05 ARG17:C.NE/1
DT-41:I.OP1/1 3.16 LYS15:C.N/1
DT-41:I.OP1/1 3.21 LYS15:C.O/1
DT-41:I.OP1/1 3.01 ARG20:C.NH2/1
DG-34:I.O3'/1 3.09 THR85:D.OG1/1
DG-33:I.OP1/1 2.91 THR85:D.N/1
DG-33:I.OP1/1 2.9 THR85:D.OG1/1
DG-33:I.OP2/1 3.16 SER84:D.N/1
DC-26:I.OP1/1 2.76 ARG28:H.NH2/1
DC-23:I.OP2/1 3.1 SER86:A.N/1
DA-22:I.OP1/1 2.98 ARG72:A.NH1/1
DA-22:I.OP1/1 2.88 PHE84:A.N/1
DA-22:I.OP2/1 3.21 ARG72:A.NH2/1
DA-22:I.O4'/1 2.99 ARG83:A.NH2/1
DG-14:I.O3'/1 2.88 ARG63:A.NH1/1
DC-13:I.OP1/1 3.34 ARG36:B.NH2/1
DC-13:I.OP2/1 3.05 ARG36:B.NH1/1
DT-3:I.OP1/1 2.78 VAL117:A.N/1
DT-3:I.OP1/1 2.43 THR118:A.OG1/1
DG7:I.OP2/1 3.35 GLY48:F.N/1
DA8:I.OP1/1 3.07 ILE46:F.N/1
DA8:I.O3'/1 3.2 GLY44:E.N/1
DA9:I.OP1/1 3.03 GLY44:E.N/1
DA9:I.OP1/1 2.64 VAL46:E.N/1
DA9:I.OP1/1 2.91 ALA47:E.N/1
DA9:I.N3/1 3.14 ARG40:E.NH1/1
DA9:I.N3/1 3.04 ARG40:E.NH2/1
DC10:I.OP1/1 2.99 TYR41:E.N/1
DC10:I.O4'/1 2.91 ARG40:E.NH2/1
DT17:I.OP1/1 2.78 ARG69:E.NH2/1
DT18:I.OP1/1 2.77 ARG63:E.NH1/1
DT18:I.OP1/1 2.84 LYS64:E.N/1
DT18:I.OP2/1 3.04 LEU65:E.N/1
DA28:I.OP1/1 2.93 LYS79:F.N/1
DA28:I.OP1/1 2.59 THR80:F.OG1/1
DA28:I.O5'/1 2.68 THR80:F.OG1/1
DT30:I.OP1/1 2.53 SER29:D.OG/1
DT38:I.O2/1 3.19 ARG42:G.NH2/1
DA39:I.OP1/1 2.52 ARG35:G.NH1/1
DA39:I.OP1/1 2.98 VAL43:G.N/1
DA39:I.OP2/1 2.39 ARG35:G.NH2/1
DG48:I.OP1/1 2.84 TYR37:H.OH/1
DT49:I.OP1/1 2.82 ARG29:G.NH1/1
DT49:I.OP1/1 2.65 ARG29:G.NH2/1
DT49:I.OP1/1 3.16 SER33:H.N/1
DA50:I.OP1/1 2.69 LYS31:H.N/1
DG57:I.O4'/1 3.1 ARG77:G.NH2/1
DC58:I.OP1/1 3.08 THR76:G.N/1
DC58:I.OP1/1 2.84 ARG77:G.N/1
DA59:I.OP2/1 2.91 LYS75:G.NZ/1
DG70:I.OP1/1 2.78 ARG42:A.N/1
DG70:I.OP1/1 2.94 THR45:A.OG1/1
DA-54:J.OP2/1 3.02 SER53:H.N/1
DT-53:J.OP1/1 2.71 TYR39:H.OH/1
DT-53:J.OP1/1 3.23 ILE51:H.N/1
DA-44:J.OP1/1 2.42 ARG32:G.NH1/1
DA-43:J.OP1/1 3.07 ARG17:G.N/1
DA-43:J.OP2/1 3.05 ARG17:G.NE/1
DG-42:J.OP1/1 2.69 LYS15:G.N/1
DG-42:J.OP1/1 2.86 ARG20:G.NH2/1
DG-34:J.OP1/1 3.34 SER84:H.N/1
DG-34:J.OP1/1 3.17 SER84:H.OG/1
DG-34:J.OP1/1 2.66 THR85:H.OG1/1
DC-24:J.OP1/1 3.38 SER86:E.N/1
DC-23:J.OP1/1 2.72 ARG72:E.NH1/1
DC-23:J.OP1/1 2.74 PHE84:E.N/1
DC-23:J.OP2/1 3.28 ARG72:E.NH2/1
DC-13:J.OP1/1 3.12 ARG36:F.NH2/1
DC-13:J.OP2/1 3.07 ARG36:F.NH1/1
DG-5:J.OP1/1 2.7 ARG42:E.NH2/1
DT-3:J.OP1/1 2.82 VAL117:E.N/1
DT-3:J.OP1/1 2.63 THR118:E.OG1/1
DG7:J.OP2/1 2.97 GLY48:B.N/1
DA8:J.OP1/1 2.87 ILE46:B.N/1
DA8:J.OP2/1 2.62 ARG35:B.NH2/1
DA8:J.O3'/1 3.11 GLY44:A.N/1
DA9:J.OP1/1 2.9 GLY44:A.N/1
DA9:J.OP1/1 2.79 VAL46:A.N/1
DA9:J.OP1/1 3.23 ALA47:A.N/1
DA9:J.N3/1 2.98 ARG40:A.NH2/1
DC10:J.OP1/1 3.15 TYR41:A.N/1
DT17:J.OP1/1 3.18 ARG69:A.NH2/1
DT17:J.OP2/1 3.05 ARG69:A.NH1/1
DT17:J.O3'/1 2.85 ARG63:A.NH2/1
DT18:J.OP1/1 3.27 LYS64:A.N/1
DT18:J.OP2/1 3.09 LEU65:A.N/1
DC27:J.OP1/1 2.73 LYS79:B.N/1
DC27:J.OP1/1 2.85 THR80:B.OG1/1
DG29:J.OP1/1 2.82 SER29:H.OG/1
DA37:J.OP1/1 3.09 ALA45:C.N/1
DT38:J.OP1/1 3.12 ARG35:C.NH1/1
DT38:J.OP1/1 3.04 VAL43:C.N/1
DG48:J.OP1/1 2.95 ARG29:C.NH1/1
DG48:J.OP1/1 3.03 ARG29:C.NH2/1
DG48:J.OP1/1 3.23 SER33:D.N/1
DT49:J.OP1/1 3.08 LYS31:D.N/1
DC58:J.OP1/1 3.11 THR76:C.N/1
DC58:J.OP1/1 2.76 ARG77:C.N/1
DC58:J.OP2/1 3.34 THR76:C.N/1
DG70:J.OP1/1 2.74 ARG42:E.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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