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Nucleic atom dist Protein atom
DG6:T.N7/1 2.51 LYS280:A.NZ/1
DG6:T.O6/1 2.9 LYS280:A.NZ/1
DG6:T.N2/1 3.25 ARG283:A.NH1/1
DG6:T.N3/1 3.35 ARG283:A.NH1/1
DT7:T.OP1/1 2.61 THR292:A.OG1/1
DC8:T.OP1/1 2.92 ASN294:A.ND2/1
DG9:T.OP1/1 2.48 TYR296:A.OH/1
DC10:T.OP1/1 3.07 THR233:A.N/1
DC10:T.OP1/1 2.92 LYS234:A.N/1
DA11:T.OP1/1 3.01 LYS230:A.N/1
DC8:P.OP1/1 3.23 GLY107:A.N/1
DC8:P.OP1/1 2.82 ALA110:A.N/1
DC8:P.OP2/1 2.94 SER109:A.N/1
DG9:P.OP1/1 2.94 GLY105:A.N/1
2DA10:P.OP1/1 3.07 ARG254:A.NH2/1
DG1:D.OP2/1 3.04 LYS68:A.NZ/1
DT2:D.OP1/1 2.88 GLY66:A.N/1
DT2:D.OP1/1 2.93 ILE69:A.N/1
DT2:D.OP2/1 3.29 LYS68:A.N/1
DC3:D.OP1/1 2.93 GLY64:A.N/1
DC409:A.O2/1 2.79 LYS262:A.NZ/1
DC409:A.N3/1 2.59 THR196:A.OG1/1
DC409:A.N4/1 3.1 ILE174:A.O/1
DC409:A.N4/1 2.9 THR176:A.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:T.N7/1 3.16 604:A/1 3.12 ASN37:A.ND2/1
DG6:T.N7/1 3.16 604:A/1 2.7 LYS280:A.NZ/1
DT7:T.OP1/1 2.66 108:T/1 2.86 ARG283:A.O/1
DT7:T.OP1/1 2.66 108:T/1 3.14 ILE293:A.N/1
DT7:T.O2/1 2.84 509:A/1 2.78 ARG283:A.NH1/1
DT7:T.O2/1 2.84 509:A/1 2.37 GLU295:A.OE2/1
DC8:T.OP1/1 2.8 536:A/1 2.56 ARG299:A.NH2/1
DC8:T.O2/1 2.81 576:A/1 2.64 GLU295:A.OE1/1
DG9:T.N2/1 3.23 615:A/1 2.96 SER229:A.OG/1
DG9:T.N2/1 3.23 615:A/1 2.72 LYS234:A.NZ/1
DC10:T.OP2/1 2.69 111:T/1 2.86 GLU232:A.N/1
DC10:T.OP2/1 2.69 111:T/1 2.86 GLU232:A.N/1
DC10:T.OP2/1 2.61 107:T/1 3.07 THR233:A.OG1/1
DA11:T.OP1/1 2.8 119:T/1 2.92 LYS230:A.O/1
DA11:T.OP2/1 2.67 528:A/1 2.53 LYS230:A.O/1
DT12:T.OP1/1 2.77 117:T/1 2.93 HIS134:A.N/1
DT12:T.OP1/1 3.15 756:A/1 2.98 HIS135:A.N/1
DG9:P.N3/1 2.61 107:P/1 2.99 LYS234:A.NZ/1
2DA10:P.OP1/1 2.75 580:A/1 2.97 ASP190:A.OD2/1
2DA10:P.O4'/1 2.83 107:P/1 2.99 LYS234:A.NZ/1
DG1:D.OP1/1 2.94 653:A/1 2.79 TYR39:A.OH/1
DG1:D.OP1/1 2.33 202:D/1 3.3 LYS72:A.NZ/1
DG1:D.OP1/1 2.94 653:A/1 2.79 LYS72:A.NZ/1
DG1:D.OP2/1 2.66 205:D/1 3.1 LYS35:A.NZ/1
DG1:D.N2/1 3.15 136:T/1 3.15 HIS34:A.O/1
DC3:D.OP2/1 2.73 206:D/1 3.22 LYS60:A.NZ/1
DC409:A.O2/1 2.61 560:A/1 2.79 LYS262:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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