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Nucleic atom dist Protein atom
DA6:T.OP2/1 2.8 LYS280:A.NZ/1
DA6:T.N3/1 2.91 ARG283:A.NH1/1
DG7:T.OP1/1 2.86 THR292:A.OG1/1
DG7:T.N2/1 3 TYR271:A.OH/1
DC8:T.OP1/1 3.13 ASN294:A.ND2/1
DG9:T.OP1/1 2.69 TYR296:A.OH/1
DG9:T.N3/1 2.78 LYS234:A.NZ/1
DC10:T.OP1/1 2.87 THR233:A.N/1
DC10:T.OP1/1 2.82 LYS234:A.N/1
DA11:T.OP1/1 3.25 LYS230:A.N/1
DC8:P.OP1/1 3.12 GLY107:A.N/1
DC8:P.OP1/1 2.84 ALA110:A.N/1
DC8:P.OP2/1 3.17 SER109:A.N/1
DG9:P.OP1/1 2.76 GLY105:A.N/1
DC10:P.OP1/1 3.19 ARG254:A.NH2/1
DG1:D.OP1/1 2.85 LYS68:A.NZ/1
DT2:D.OP1/1 2.96 GLY66:A.N/1
DT2:D.OP1/1 2.9 ILE69:A.N/1
DT2:D.OP2/1 3.27 LYS68:A.N/1
DC3:D.OP1/1 2.91 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA6:T.OP1/1 3 697:A/1 2.94 HIS34:A.ND1/1
DA6:T.OP1/1 3 697:A/1 2.95 ASN37:A.ND2/1
DG7:T.OP1/1 3.05 647:A/1 2.82 ARG283:A.O/1
DG7:T.OP1/1 3.05 647:A/1 2.91 ILE293:A.N/1
DG7:T.N2/1 3.37 569:A/1 2.67 GLU295:A.OE2/1
DG7:T.N3/1 3.17 548:A/1 2.92 ARG283:A.NH1/1
DG7:T.N3/1 3.17 548:A/1 2.62 GLU295:A.OE1/1
DC8:T.OP1/1 2.55 106:T/1 3.02 ARG299:A.NH2/1
DC8:T.O4'/1 3.25 548:A/1 2.92 ARG283:A.NH1/1
DC8:T.O4'/1 3.25 548:A/1 2.62 GLU295:A.OE1/1
DC8:T.O2/1 2.83 111:T/1 3.02 LYS234:A.NZ/1
DG9:T.O4'/1 2.69 111:T/1 3.02 LYS234:A.NZ/1
DG9:T.N2/1 3.4 120:P/1 3.08 LYS234:A.NZ/1
DC10:T.OP2/1 2.86 122:T/1 2.88 GLU232:A.N/1
DA11:T.O3'/1 3.08 135:T/1 3.12 HIS135:A.N/1
DG7:P.OP1/1 2.43 105:P/1 2.97 SER109:A.OG/1
DG9:P.OP2/1 2.83 118:P/1 3.03 LYS27:A.NZ/1
DG9:P.N3/1 2.88 120:P/1 3.08 LYS234:A.NZ/1
DC10:P.OP1/1 2.86 645:A/1 2.86 SER104:A.OG/1
DC10:P.OP1/1 2.68 110:P/1 2.79 ASP190:A.OD2/1
DC10:P.OP1/1 2.86 645:A/1 2.81 ARG254:A.NE/1
DC10:P.O3'/1 2.87 622:A/1 2.79 ASP190:A.OD2/1
DG1:D.OP1/1 2.79 551:A/1 2.63 TYR39:A.OH/1
DG1:D.OP1/1 2.79 551:A/1 2.63 LYS72:A.NZ/1
DG1:D.OP1/1 2.7 106:D/1 2.76 LYS72:A.NZ/1
DG4:D.OP1/1 3.05 112:D/1 3.12 GLU288:A.OE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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