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Nucleic atom dist Protein atom
DA9:X.OP2/1 2.97 ASN460:S.ND2/1
DA11:X.OP1/1 2.71 ARG413:S.O/1
DA11:X.O5'/1 3.26 ARG413:S.NH2/1
DT12:X.OP2/1 3.34 ARG413:S.NE/1
DT12:X.OP2/1 2.55 ARG413:S.NH1/1
DT15:X.O2/1 2.82 ASN485:R.ND2/1
DA16:X.O3'/1 2.97 GLN484:R.OE1/1
DG17:X.OP1/1 2.93 GLN484:R.NE2/1
DG17:X.O4'/1 2.91 GLN484:R.OE1/1
DA19:X.OP1/1 2.37 SER444:R.OG/1
DT24:X.OP1/1 2.73 ARG121:R.NH2/1
DT25:X.OP1/1 2.71 ARG120:R.O/1
DT25:X.OP1/1 2.74 SER122:R.N/1
DT25:X.OP1/1 3.12 SER122:R.OG/1
DT27:X.OP2/1 2.59 SER75:R.OG/1
DA44:X.N7/1 3.35 SER480:B.OG/1
DT15:Y.OP1/1 3.09 LYS236:B.NZ/1
DT19:Y.O5'/1 2.74 LYS1391:A.NZ/1
DT19:Y.O3'/1 2.9 GLU1390:A.OE2/1
DG21:Y.OP2/1 3.28 ARG365:A.NH1/1
DT24:Y.OP2/1 2.32 ARG1061:B.NE/1
DA36:Y.OP2/1 2.66 GLN118:P.NE2/1
DT42:Y.O4'/1 2.83 GLY119:R.O/1
DT45:Y.O3'/1 3.28 ARG424:R.O/1
DA46:Y.OP1/1 2.78 ARG424:R.NH1/1
DC47:Y.OP2/1 2.94 ARG424:R.NH2/1
DT48:Y.OP1/1 2.79 THR438:R.OG1/1
DA52:Y.OP1/1 2.55 SER535:R.OG/1
DT53:Y.O3'/1 2.71 GLU514:R.OE2/1
DA54:Y.OP1/1 2.46 ARG219:R.N/1
DA54:Y.OP2/1 2.21 ARG258:R.NH2/1
DT55:Y.OP1/1 2.87 ASN407:S.ND2/1
DT55:Y.OP1/1 3.01 TYR408:S.N/1
DT55:Y.OP2/1 2.5 ALA251:R.N/1
DT55:Y.OP2/1 2.66 THR254:R.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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