Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA6:B.OP1/1 3.33 LYS254:D.N/1
DG7:B.OP2/1 3.23 ARG278:D.NH1/1
DG7:B.OP2/1 2.84 ARG278:D.NH2/1
DG7:B.N7/1 3 LYS271:D.NZ/1
DG7:B.O6/1 2.8 LYS271:D.NZ/1
DA9:B.N7/1 2.97 GLN275:D.OE1/1
DA9:B.N6/1 3.19 GLN275:D.NE2/1
DT10:B.OP1/1 2.95 TRP230:A.N/1
DA11:B.OP1/1 2.81 MET228:A.N/1
DA11:B.N7/1 2.94 SER272:A.OG/1
DG6:U.OP1/1 2.27 THR252:A.OG1/1
DG6:U.OP1/1 3.22 LYS254:A.N/1
DG7:U.OP2/1 3.21 ARG278:A.NH1/1
DG7:U.OP2/1 2.85 ARG278:A.NH2/1
DG7:U.N7/1 3.07 LYS271:A.NZ/1
DG7:U.O6/1 2.69 LYS271:A.NZ/1
DA9:U.N7/1 2.99 GLN275:A.OE1/1
DA9:U.N6/1 3.07 GLN275:A.NE2/1
DT10:U.OP1/1 2.87 TRP230:D.N/1
DA11:U.OP1/1 2.67 MET228:D.N/1
DA11:U.N7/1 3.05 SER272:D.OG/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text