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Nucleic atom dist Protein atom
DA-62:I.OP2/1 3.41 LYS74:C.NZ/1
DA-54:I.OP1/1 2.8 SER53:D.N/1
DA-54:I.OP2/1 2.96 SER53:D.OG/1
DA-43:I.OP2/1 3.29 ARG32:C.NH1/1
DG-42:I.OP1/1 2.71 ARG17:C.N/1
DG-42:I.OP2/1 3.04 ARG17:C.NE/1
DT-41:I.OP1/1 3.14 LYS15:C.N/1
DG-33:I.OP1/1 2.98 THR85:D.N/1
DG-33:I.OP1/1 2.74 THR85:D.OG1/1
DG-33:I.OP2/1 3.25 SER84:D.N/1
DC-23:I.OP2/1 2.92 SER86:A.N/1
DC-23:I.O2/1 2.91 ARG83:A.NH2/1
DA-22:I.OP1/1 2.88 ARG72:A.NH1/1
DA-22:I.OP1/1 2.85 PHE84:A.N/1
DA-22:I.OP2/1 2.92 ARG72:A.NH2/1
DC-13:I.OP1/1 2.89 ARG63:A.NH1/1
DC-13:I.OP1/1 2.83 ARG36:B.NH2/1
DC-13:I.OP2/1 2.86 ARG36:B.NH1/1
DG-5:I.OP2/1 3.03 ARG42:A.NH1/1
DT-3:I.OP1/1 2.79 VAL117:A.N/1
DT-3:I.OP1/1 2.85 THR118:A.OG1/1
DT7:I.OP2/1 2.89 GLY48:F.N/1
DG8:I.OP1/1 2.73 ILE46:F.N/1
DG8:I.O3'/1 3.23 GLY44:E.N/1
DA9:I.OP1/1 2.72 GLY44:E.N/1
DA9:I.OP1/1 2.88 VAL46:E.N/1
DA9:I.OP1/1 3.06 ALA47:E.N/1
DA9:I.N3/1 2.61 ARG40:E.NH2/1
DA10:I.OP1/1 2.84 TYR41:E.N/1
DA10:I.O4'/1 3.45 ARG40:E.NH2/1
DT17:I.O3'/1 3.17 ARG63:E.NH1/1
DT18:I.OP1/1 2.48 ARG63:E.NH1/1
DT18:I.OP1/1 2.89 LYS64:E.N/1
DT18:I.OP2/1 2.83 LEU65:E.N/1
DG27:I.OP2/1 3.16 LYS79:F.NZ/1
DC28:I.OP1/1 2.81 LYS79:F.N/1
DC28:I.OP1/1 2.8 THR80:F.OG1/1
DG30:I.OP1/1 3.37 THR29:D.N/1
DA38:I.OP1/1 2.67 ALA45:G.N/1
DT39:I.OP1/1 2.51 ARG35:G.NH1/1
DT39:I.OP1/1 3.11 VAL43:G.N/1
DT39:I.OP2/1 2.31 ARG35:G.NH2/1
DG48:I.N3/1 3.47 ARG30:H.NH1/1
DG49:I.OP1/1 3.26 ARG29:G.NH1/1
DG49:I.OP1/1 3.03 ARG29:G.NH2/1
DG49:I.OP1/1 3.06 SER33:H.N/1
DG49:I.OP1/1 3.21 SER33:H.O/1
DG49:I.O4'/1 2.7 ARG30:H.NH1/1
DT50:I.OP1/1 2.83 LYS31:H.N/1
DC59:I.OP1/1 3.15 ARG77:G.N/1
DC59:I.OP2/1 3.24 THR76:G.N/1
DA-55:J.OP1/1 2.76 SER53:H.N/1
DA-55:J.OP2/1 2.85 SER53:H.OG/1
DA-45:J.OP1/1 3.1 GLU32:H.OE1/1
DA-44:J.OP1/1 3.15 ARG32:G.NH1/1
DG-43:J.OP1/1 3.02 ARG17:G.N/1
DG-43:J.OP2/1 2.92 ARG17:G.NE/1
DG-43:J.OP2/1 3.01 ARG17:G.NH2/1
DT-42:J.OP1/1 3.15 LYS15:G.N/1
DT-42:J.OP1/1 2.88 ARG20:G.NH2/1
DG-34:J.OP1/1 2.87 THR85:H.N/1
DG-34:J.OP1/1 2.84 THR85:H.OG1/1
DG-34:J.OP2/1 2.79 SER84:H.N/1
DG-34:J.OP2/1 3.2 SER84:H.OG/1
DC-24:J.OP2/1 2.99 SER86:E.N/1
DA-23:J.OP1/1 2.73 ARG72:E.NH1/1
DA-23:J.OP1/1 2.92 PHE84:E.N/1
DA-23:J.OP2/1 2.87 ARG72:E.NH2/1
DA-13:J.OP1/1 2.7 ARG36:F.NH2/1
DA-13:J.OP2/1 2.78 ARG36:F.NH1/1
DC-5:J.OP1/1 2.72 ARG42:E.NE/1
DC-5:J.OP1/1 2.72 ARG42:E.NH2/1
DC-5:J.OP2/1 3.19 ARG42:E.NH2/1
DG-3:J.OP1/1 2.92 VAL117:E.N/1
DG-3:J.OP1/1 2.67 THR118:E.OG1/1
DG7:J.OP2/1 3.06 GLY48:B.N/1
DA8:J.OP1/1 2.66 ILE46:B.N/1
DA8:J.OP2/1 2.44 ARG35:B.NH2/1
DA8:J.O3'/1 3.18 GLY44:A.N/1
DA9:J.OP1/1 2.86 GLY44:A.N/1
DA9:J.OP1/1 2.9 VAL46:A.N/1
DA9:J.OP1/1 3.03 ALA47:A.N/1
DA9:J.N3/1 2.56 ARG40:A.NH2/1
DC10:J.OP1/1 2.88 TYR41:A.N/1
DT17:J.OP1/1 2.99 ARG69:A.NH2/1
DT17:J.OP2/1 2.88 ARG69:A.NH1/1
DT18:J.OP1/1 3.22 LYS64:A.N/1
DT18:J.OP2/1 2.84 LEU65:A.N/1
DA25:J.N3/1 3.19 ARG83:A.NH1/1
DC27:J.OP1/1 2.85 LYS79:B.N/1
DC27:J.OP1/1 2.95 THR80:B.OG1/1
DG29:J.OP1/1 2.81 THR29:H.N/1
DA37:J.OP1/1 3 ALA45:C.N/1
DT38:J.OP1/1 3.28 ARG35:C.NH1/1
DT38:J.OP1/1 3.36 VAL43:C.N/1
DT38:J.OP2/1 3.25 ARG35:C.NH2/1
DG47:J.O3'/1 2.87 ARG29:C.NH1/1
DG48:J.OP1/1 3.03 ARG29:C.NH1/1
DG48:J.OP1/1 2.68 ARG29:C.NH2/1
DG48:J.OP1/1 2.97 SER33:D.N/1
DG48:J.OP1/1 3.16 SER33:D.O/1
DT49:J.OP1/1 2.68 LYS31:D.N/1
DC58:J.OP1/1 3.11 THR76:C.N/1
DC58:J.OP1/1 2.84 ARG77:C.N/1
DC58:J.OP2/1 2.99 THR76:C.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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