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Nucleic atom dist Protein atom
DA19:I.OP1/1 2.87 SER56:D.N/1
DA19:I.OP1/1 3.07 SER56:D.OG/1
DA19:I.OP2/1 3 SER56:D.OG/1
DT20:I.OP1/1 2.58 TYR42:D.OH/1
DT20:I.OP1/1 3.03 ILE54:D.N/1
DA27:I.O3'/1 3.22 ARG33:D.NH1/1
DA29:I.OP1/1 3.11 ARG32:C.NE/1
DA29:I.OP1/1 2.9 ARG32:C.NH2/1
DA30:I.OP1/1 3.08 ARG17:C.N/1
DA30:I.OP2/1 3.09 ARG17:C.NH1/1
DG31:I.OP1/1 3.03 LYS15:C.N/1
DG31:I.OP1/1 2.62 ARG20:C.NH2/1
DG31:I.O4'/1 2.94 ARG11:C.NH1/1
DT32:I.OP1/1 2.72 ALA12:C.N/1
DC49:I.O4'/1 2.87 ARG83:A.NH2/1
DC50:I.OP1/1 2.27 ARG72:A.NH2/1
DC50:I.OP1/1 2.69 PHE84:A.N/1
DC60:I.OP1/1 2.91 ARG36:B.NH2/1
DC60:I.OP2/1 2.98 ARG36:B.NH1/1
DG68:I.OP1/1 2.7 ARG42:A.NE/1
DG68:I.OP1/1 3.1 ARG42:A.NH2/1
DT70:I.OP1/1 2.81 VAL117:A.N/1
DT70:I.OP1/1 2.73 THR118:A.OG1/1
DG81:I.OP1/1 2.57 ILE46:F.N/1
DG81:I.OP1/1 3.23 ILE46:F.O/1
DA82:I.OP1/1 3.11 GLY44:E.N/1
DA82:I.OP1/1 2.96 VAL46:E.N/1
DA82:I.OP1/1 2.97 ALA47:E.N/1
DA82:I.N3/1 3.15 ARG40:E.NH2/1
DA83:I.OP1/1 2.72 TYR41:E.N/1
DT90:I.OP1/1 2.51 ARG69:E.NH2/1
DT91:I.OP1/1 3.11 ARG63:E.NE/1
DT91:I.OP1/1 2.87 LYS64:E.N/1
DT91:I.OP2/1 2.86 LEU65:E.N/1
DC101:I.OP1/1 2.6 LYS79:F.N/1
DC101:I.OP1/1 2.98 THR80:F.OG1/1
DA111:I.OP1/1 3.07 ALA45:G.N/1
DT112:I.OP1/1 3.2 VAL43:G.N/1
DG122:I.OP1/1 3.29 ARG29:G.NH1/1
DG122:I.OP1/1 3.29 ARG29:G.NH2/1
DG122:I.OP1/1 2.99 SER36:H.N/1
DT123:I.OP1/1 3.04 LYS34:H.N/1
DG131:I.OP1/1 3.08 THR76:G.N/1
DG131:I.OP1/1 2.79 ARG77:G.N/1
DG131:I.OP2/1 3.16 THR76:G.N/1
DT143:I.OP1/1 2.78 ARG42:A.N/1
DT143:I.OP1/1 2.66 THR45:A.OG1/1
DT166:J.OP1/1 2.78 SER56:H.N/1
DT167:J.OP1/1 2.45 TYR42:H.OH/1
DT167:J.OP1/1 3.39 ILE54:H.N/1
DA176:J.OP1/1 3.16 ARG32:G.NE/1
DA176:J.OP1/1 2.96 ARG32:G.NH2/1
DA176:J.OP2/1 3.35 ARG32:G.NE/1
DG177:J.OP1/1 3.07 ARG17:G.N/1
DG177:J.OP2/1 3.06 ARG17:G.NE/1
DT178:J.OP1/1 2.92 LYS15:G.N/1
DT178:J.OP2/1 3.18 ARG20:G.NH1/1
DT178:J.OP2/1 3.3 ARG20:G.NH2/1
DG186:J.OP1/1 2.96 SER87:H.N/1
DG186:J.OP1/1 2.89 THR88:H.N/1
DG186:J.OP1/1 2.9 THR88:H.OG1/1
DG186:J.OP2/1 3 SER87:H.N/1
DA187:J.OP1/1 2.92 ARG86:H.NH1/1
DA187:J.OP2/1 2.54 ARG86:H.NH2/1
DA197:J.OP1/1 2.22 ARG72:E.NH2/1
DA197:J.OP1/1 2.76 PHE84:E.N/1
DT198:J.OP1/1 2.97 ARG19:F.N/1
DT198:J.OP2/1 3.04 ARG19:F.NH1/1
DA207:J.OP1/1 3.08 ARG63:E.NH1/1
DA207:J.OP1/1 2.88 ARG36:F.NH2/1
DA207:J.OP2/1 2.97 ARG36:F.NH1/1
DC215:J.OP1/1 2.71 ARG42:E.NE/1
DC215:J.OP1/1 3.12 ARG42:E.NH2/1
DG217:J.OP1/1 2.79 VAL117:E.N/1
DG217:J.OP1/1 2.88 THR118:E.OG1/1
DG227:J.OP1/1 3.26 GLY48:B.N/1
DA228:J.OP1/1 2.9 ILE46:B.N/1
DA229:J.OP1/1 2.87 GLY44:A.N/1
DA229:J.OP1/1 2.93 VAL46:A.N/1
DA229:J.OP1/1 3.09 ALA47:A.N/1
DA229:J.N3/1 2.98 ARG40:A.NH2/1
DC230:J.OP1/1 2.88 TYR41:A.N/1
DT237:J.OP1/1 2.93 ARG69:A.NH2/1
DT237:J.OP2/1 2.54 ARG69:A.NH2/1
DT238:J.OP1/1 3.11 ARG63:A.NE/1
DT238:J.OP1/1 3.02 LYS64:A.N/1
DT238:J.OP2/1 2.83 LEU65:A.N/1
DC247:J.O3'/1 3.22 THR80:B.OG1/1
DA248:J.OP1/1 3.01 LYS79:B.N/1
DA248:J.OP1/1 2.98 THR80:B.N/1
DT258:J.OP1/1 3.27 ALA45:C.N/1
DA259:J.OP1/1 2.91 VAL43:C.N/1
DT264:J.O4'/1 3.05 ARG11:C.NH2/1
DG268:J.OP1/1 2.68 TYR40:D.OH/1
DT269:J.OP1/1 3.16 ARG29:C.NH1/1
DT269:J.OP1/1 3.27 ARG29:C.NH2/1
DT269:J.OP1/1 3.1 SER36:D.N/1
DA270:J.OP1/1 2.66 LYS34:D.N/1
DC278:J.OP2/1 2.69 THR76:C.N/1
DC278:J.OP2/1 3.41 ARG77:C.N/1
DA279:J.OP1/1 3.24 LYS75:C.NZ/1
DG290:J.OP1/1 2.92 ARG42:E.N/1
DG290:J.OP1/1 2.56 THR45:E.OG1/1
DT292:J.OP2/1 3.29 LYS37:E.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT8:I.OP1/1 2.76 350:I/1 3.11 ARG49:E.O/1
DA19:I.OP1/1 2.81 357:I/1 3.01 SER56:D.OG/1
DA19:I.OP1/1 2.81 357:I/1 3.18 LYS57:D.N/1
DT20:I.OP2/1 2.67 341:I/1 2.89 ILE54:D.O/1
DA28:I.OP1/1 2.81 215:D/1 2.76 GLU35:D.OE1/1
DA29:I.OP1/1 3 326:C/1 2.94 ARG29:C.NE/1
DA29:I.OP1/1 3 326:C/1 3.24 ARG29:C.NH2/1
DA30:I.OP1/1 2.37 321:I/1 3.23 SER18:C.N/1
DA30:I.OP1/1 2.37 321:I/1 3.04 GLY28:C.N/1
DG39:I.OP1/1 2.94 218:D/1 2.81 SER87:D.N/1
DG39:I.OP2/1 2.86 218:D/1 2.81 SER87:D.N/1
DA61:I.OP2/1 3.17 218:B/1 2.92 LYS31:B.N/1
DG68:I.N3/1 2.48 327:I/1 3.33 ARG45:B.NH2/1
DC69:I.OP1/1 2.19 312:I/1 3.24 PRO43:A.O/1
DC69:I.OP1/1 3.18 211:B/1 2.64 LYS44:B.NZ/1
DT70:I.OP2/1 2.88 368:I/1 3.06 LYS115:A.O/1
DG71:I.OP1/1 2.83 359:I/1 3.29 LYS122:A.NZ/1
DG81:I.OP2/1 2.9 208:F/1 2.53 ILE46:F.O/1
DG81:I.OP2/1 2.9 208:F/1 2.9 TYR51:F.OH/1
DG98:I.N2/1 2.98 330:I/1 3.2 ARG83:E.NH2/1
DG98:I.N3/1 2.55 330:I/1 3.2 ARG83:E.NH2/1
DA99:I.O4'/1 2.76 330:I/1 3.2 ARG83:E.NH2/1
DG121:I.OP2/1 3.09 213:H/1 2.97 LYS43:H.NZ/1
DG121:I.N3/1 3.07 201:H/1 2.29 ARG33:H.NH1/1
DG122:I.OP2/1 2.38 322:I/1 2.85 SER36:H.O/1
DG122:I.OP2/1 2.38 322:I/1 3.08 ILE39:H.N/1
DG131:I.OP1/1 2.88 370:I/1 3.08 ARG77:G.O/1
DG164:J.N2/1 3.3 321:G/1 2.84 ARG77:G.NH1/1
DA165:J.N3/1 2.93 321:G/1 2.84 ARG77:G.NH1/1
DT166:J.OP1/1 2.91 475:J/1 3.38 LYS57:H.N/1
DA176:J.OP1/1 2.83 464:J/1 3.17 ARG29:G.NE/1
DG177:J.OP1/1 2.66 434:J/1 3.25 SER18:G.N/1
DG177:J.OP1/1 2.66 434:J/1 3.22 SER18:G.OG/1
DG177:J.OP1/1 2.66 434:J/1 3.26 GLY28:G.N/1
DA207:J.OP1/1 2.95 222:F/1 2.84 THR30:F.OG1/1
DT208:J.OP2/1 2.73 442:J/1 2.97 LYS31:F.N/1
DT216:J.OP1/1 2.88 221:F/1 2.82 LYS44:F.NZ/1
DA228:J.OP2/1 3.12 204:B/1 2.45 TYR51:B.OH/1
DA257:J.N3/1 2.73 443:J/1 3.2 ARG42:C.NH2/1
DT269:J.OP2/1 2.83 463:J/1 2.89 SER36:D.O/1
DT269:J.OP2/1 2.83 463:J/1 3.03 SER38:D.N/1
DT269:J.OP2/1 2.83 463:J/1 2.88 ILE39:D.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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