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Nucleic atom dist Protein atom
DC-64:I.OP1/1 2.49 LYS56:E.NZ/1
DA-54:I.OP1/1 2.75 SER53:D.N/1
DA-54:I.OP2/1 3.12 SER53:D.OG/1
DG-53:I.OP2/1 2.23 TYR39:D.OH/1
DG-53:I.OP2/1 3.46 ILE51:D.N/1
DA-44:I.OP2/1 3.27 ARG32:C.NH1/1
DT-43:I.OP2/1 2.7 ARG17:C.NE/1
DT-42:I.OP1/1 3.45 LYS15:C.N/1
DT-42:I.OP1/1 2.54 ARG20:C.NH2/1
DT-42:I.O5'/1 3.42 LYS13:C.NZ/1
DT-42:I.O3'/1 2.97 ARG12:C.NH2/1
DA-35:I.O3'/1 3.48 ARG42:C.NH1/1
DG-34:I.OP1/1 2.96 SER84:D.N/1
DG-34:I.OP1/1 3.09 THR85:D.N/1
DG-34:I.OP1/1 2.51 THR85:D.OG1/1
DC-27:I.OP1/1 2.55 LYS27:H.NZ/1
DG-24:I.OP2/1 3.17 SER86:A.N/1
DC-23:I.OP1/1 2.6 ARG72:A.NH1/1
DC-23:I.OP1/1 3.11 PHE84:A.N/1
DC-23:I.OP2/1 2.74 ARG72:A.NH2/1
DA-13:I.OP1/1 2.84 ARG36:B.NH2/1
DA-13:I.OP2/1 2.93 ARG36:B.NH1/1
DA-5:I.OP1/1 2.92 ARG42:A.NE/1
DA-5:I.OP1/1 2.72 ARG42:A.NH2/1
DG-3:I.OP1/1 3.05 VAL117:A.N/1
DG-3:I.OP1/1 2.44 THR118:A.OG1/1
DC7:I.OP2/1 3.13 GLY48:F.N/1
DC8:I.OP1/1 2.69 ILE46:F.N/1
DC8:I.OP2/1 3.33 ARG35:F.NH1/1
DG9:I.OP1/1 2.93 GLY44:E.N/1
DG9:I.OP1/1 2.99 VAL46:E.N/1
DG9:I.OP1/1 3.11 ALA47:E.N/1
DG9:I.N3/1 3.51 ARG40:E.NH2/1
DC10:I.OP1/1 3.12 TYR41:E.N/1
DC10:I.O4'/1 2.83 ARG40:E.NH2/1
DA17:I.OP2/1 2.54 ARG69:E.NH2/1
DC18:I.OP1/1 3.11 LYS64:E.N/1
DC18:I.OP2/1 2.96 LEU65:E.N/1
DA26:I.O3'/1 3.45 ARG83:E.NE/1
DA26:I.O3'/1 2.86 ARG83:E.NH2/1
DG27:I.OP1/1 3.13 ARG83:E.NH2/1
DA28:I.OP1/1 2.96 LYS79:F.N/1
DA28:I.OP1/1 2.38 THR80:F.OG1/1
DT38:I.OP1/1 3.24 ALA45:G.N/1
DA39:I.OP1/1 2.91 VAL43:G.N/1
DG48:I.OP1/1 2.95 TYR37:H.OH/1
DC49:I.OP1/1 3.16 ARG29:G.NH1/1
DC49:I.OP1/1 2.86 ARG29:G.NH2/1
DA50:I.OP1/1 2.78 LYS31:H.N/1
DA50:I.OP2/1 3.01 LYS31:H.NZ/1
DG52:I.OP1/1 2.26 ARG26:H.NH1/1
DG58:I.OP1/1 2.95 THR76:G.N/1
DG58:I.OP1/1 2.73 ARG77:G.N/1
DT70:I.OP1/1 2.65 ARG42:A.N/1
DT70:I.OP1/1 3.01 THR45:A.OG1/1
DC-54:J.OP1/1 3.36 SER53:H.N/1
DA-53:J.OP2/1 2 TYR39:H.OH/1
DG-44:J.OP2/1 2.41 ARG32:G.NH1/1
DG-42:J.OP1/1 2.73 LYS15:G.N/1
DG-42:J.OP1/1 2.49 LYS15:G.O/1
DG-42:J.OP1/1 3.11 ARG20:G.NH1/1
DA-34:J.OP1/1 3.03 SER84:H.N/1
DA-34:J.OP1/1 2.93 THR85:H.N/1
DA-34:J.OP1/1 2.28 THR85:H.OG1/1
DA-34:J.OP2/1 3.2 SER84:H.N/1
DA-34:J.OP2/1 3.01 SER84:H.OG/1
DC-27:J.OP1/1 3.25 ARG26:D.N/1
DG-24:J.OP2/1 3.29 SER86:E.N/1
DT-23:J.OP1/1 2.9 ARG72:E.NH1/1
DT-23:J.OP1/1 3.17 PHE84:E.N/1
DT-23:J.OP2/1 2.81 ARG72:E.NH2/1
DA-13:J.OP1/1 3.05 ARG36:F.NH2/1
DA-13:J.OP2/1 2.92 ARG36:F.NH1/1
DA-5:J.OP1/1 3.07 ARG42:E.NE/1
DA-5:J.OP1/1 3.04 ARG42:E.NH2/1
DA-3:J.OP1/1 2.82 VAL117:E.N/1
DA-3:J.OP1/1 2.95 THR118:E.OG1/1
DC7:J.OP1/1 3.15 GLY48:B.N/1
DG8:J.OP2/1 2.59 ARG35:B.NH2/1
DG8:J.OP2/1 3.34 ILE46:B.N/1
DG8:J.O3'/1 3.23 GLY44:A.N/1
DT9:J.OP1/1 2.78 GLY44:A.N/1
DT9:J.OP1/1 2.87 VAL46:A.N/1
DT9:J.OP1/1 2.92 ALA47:A.N/1
DT9:J.O2/1 2.83 ARG40:A.NH2/1
DG10:J.OP1/1 2.74 TYR41:A.N/1
DG18:J.OP1/1 3.16 LYS64:A.N/1
DG18:J.OP2/1 3.07 LEU65:A.N/1
DA28:J.OP1/1 3.17 LYS79:B.N/1
DA28:J.OP1/1 2.53 THR80:B.OG1/1
DG38:J.O4'/1 3.21 ARG42:C.NH2/1
DA39:J.OP1/1 2.64 VAL43:C.N/1
DG48:J.OP1/1 2.53 TYR37:D.OH/1
DC49:J.OP1/1 2.7 ARG29:C.NH2/1
DG50:J.OP1/1 2.71 LYS31:D.N/1
DG51:J.OP1/1 2.35 ARG28:D.N/1
DC58:J.OP1/1 2.91 ARG77:C.N/1
DC58:J.OP2/1 3.2 THR76:C.N/1
DA59:J.OP2/1 3.21 LYS75:C.NZ/1
DT70:J.OP1/1 2.74 ARG42:E.N/1
DT70:J.OP1/1 2.94 THR45:E.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG-24:I.OP1/1 2.37 202:I/1 3.04 GLN85:A.NE2/1
DC58:J.OP1/1 2.5 202:J/1 2.89 ARG77:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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