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Nucleic atom dist Protein atom
DG4:Q.O5'/1 3.5 ARG486:N.NH2/1
DG12:Q.OP1/1 2.85 ASN1442:N.N/1
DA13:Q.OP1/1 2.93 ARG615:N.NH1/1
DG14:Q.OP1/1 3.1 LYS610:N.NZ/1
DT15:Q.OP2/1 3.47 LYS610:N.NZ/1
DC16:Q.OP1/1 2.68 ARG1031:M.NE/1
DC17:Q.OP1/1 3.17 ARG1031:M.N/1
DC17:Q.OP1/1 2.29 ARG622:N.NH1/1
DC17:Q.OP2/1 2.96 ARG622:N.NH2/1
DA18:Q.OP1/1 2.78 LYS1024:M.N/1
DA4:R.OP2/1 2.89 LYS234:P.N/1
DA5:R.OP2/1 2.54 SER236:P.OG/1
DT6:R.O2/1 3.37 LEU194:P.N/1
DT6:R.N3/1 2.93 ASN191:P.OD1/1
DG7:R.N7/1 2.97 ARG193:P.NH2/1
DG8:R.OP1/1 3.1 LYS200:P.NZ/1
DG8:R.O6/1 2.61 ARG82:P.NE/1
DG8:R.N2/1 3.08 ASP79:P.OD1/1
DG9:R.O6/1 2.47 ARG243:M.NH2/1
DG11:R.N7/1 2.6 ARG266:M.NH1/1
DG11:R.O6/1 2.73 ARG266:M.NH1/1
DG11:R.N2/1 3.44 TYR256:M.OH/1
DT13:R.O4/1 2.8 GLY169:M.O/1
DG14:R.O6/1 2.38 ARG331:M.NH2/1
DG14:R.N2/1 2.49 ASP326:M.OD1/1
G2:S.OP1/1 2.72 GLN567:M.NE2/1
G2:S.O3'/1 2.89 LYS838:M.NZ/1
A3:S.OP1/1 2.76 LYS838:M.NZ/1
A3:S.OP1/1 2.39 LYS846:M.NZ/1
A3:S.O3'/1 3.24 ASP743:N.OD1/1
A3:S.O2'/1 2.83 ARG704:N.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA18:Q.N6/1 2.68 201:Q/1 2.9 ASP326:P.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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